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WormBase Tree Display for Gene: WBGene00032754

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Name Class

WBGene00032754SMapS_parentSequencecb25.fpc2501b
IdentityVersion2
NameCGC_nameCbr-tat-2From_analysisInferred_from_orthology
Sequence_nameCBG11664
Molecular_nameCBG11664a
CBG11664a.1
CBP44606
CBG11664b
CBP38023
CBG11664b.1
Other_nameCBG_11664Accession_evidenceNDBHE600992
Public_nameCbr-tat-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-tat-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtat
Allele (32)
RNASeq_FPKMWBls:00000025.15161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.11243From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.75979From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.42589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.84857From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.90839From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.576043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.991271From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.4065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.7122From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.898248From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000044.79827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.80464From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.811From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
4.24427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
4.89175From_analysisRNASeq.briggsae.WBls:0000004.control_mean
5.01061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.59462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.753552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.18741From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.81391From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.50077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
24.3819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.34409From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.95591From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003510.4201From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.6656From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.3649From_analysisRNASeq.briggsae.WBls:0000038.control_mean
14.9794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.0696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
30.0589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.35187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.8568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.12293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.21From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.36804From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.52609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.17896From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.8616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.1731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.45842From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006311.4643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.6812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
12.1433From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
12.4929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
13.3069From_analysisRNASeq.briggsae.WBls:0000063.control_mean
18.753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
11.9122From_analysisRNASeq.briggsae.WBls:0000063.control_median
12.3283From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.43498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001017.75979From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.40887From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.98054From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.00862From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136117
00136118
00136119
00136120
00136121
00136122
00136123
00136124
Ortholog (46)
ParalogWBGene00025623Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032829Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036728Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037766Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP hydrolysis activity; ATPase-coupled intramembrane lipid transporter activity; and ion binding activity. Predicted to be involved in phospholipid transport. Predicted to be located in membrane. Is an ortholog of C. elegans tat-2. In C. elegans, tat-2 is involved in sterol metabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11664a
CBG11664b
Corresponding_CDS_historyCBG11664:bp194
CBG11664:bp255
Corresponding_transcriptCBG11664a.1
CBG11664b.1
Other_sequence (30)
Experimental_infoExpr_patternExpr1068948
Microarray_resultsGPL8303_CB6_WBGene00032754_A
GPL14143_CBG11664_1957-2016_0.797_115_C
GPL14143_CBG11664_2451-2510_0.805_98_B
GPL14143_CBG11664_4244-4303_0.904_19_A
MethodGene