WormBase Tree Display for Gene: WBGene00032777

WBGene00032777 SMap: S_parent: Sequence: cb25.fpc2587
  Identity: Version: 2
    Name: CGC_name: Cbr-scav-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG11692
      Molecular_name: CBG11692
        CBG11692.1
        CBP45727
      Other_name: CBG_11692 Accession_evidence: NDB HE601289
      Public_name: Cbr-scav-3
    DB_info: Database: NDB locus_tag CBG_11692
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:02 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 08 Mar 2010 13:33:58 WBPerson2970 Name_change: CGC_name: Cbr-scav-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: scav
    Allele: WBVar00117349
      WBVar00117345
      WBVar00117346
      WBVar00117347
      WBVar00117348
    RNASeq_FPKM: WBls:0000002 20.7218 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        31.2834 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        37.5875 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        60.7572 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        19.39 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        26.0026 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        33.0381 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 45.1146 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        49.6142 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        54.1138 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        51.7383 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        55.9864 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 38.2415 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        41.3268 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        44.4121 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        38.7617 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        41.8396 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        43.6748 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        44.1078 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 16.8173 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.83082 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        39.1374 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        9.48375 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        16.2405 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        18.3623 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        22.9972 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 21.683 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 25.9017 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        26.4246 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        30.4583 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        34.492 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        35.449 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        7.24119 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 30.1486 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        30.6015 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        31.5389 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        32.4762 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        33.565 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        41.0338 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        36.755 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        38.9975 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        44.1975 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        55.5274 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 12.3585 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        13.5459 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        13.9219 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        14.7551 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        15.0617 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        20.7273 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        14.3385 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        16.5101 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        23.7519 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 29.4911 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        31.2834 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        31.6746 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        33.452 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00136132
    Contained_in_operon: CBOPA0293
    Ortholog (31)
    Paralog: WBGene00025076 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032955 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035102 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035617 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036715 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans scav-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG11692
    Corresponding_CDS_history: CBG11692:bp194
      CBG11692:bp255
    Corresponding_transcript: CBG11692.1
    Other_sequence (14)
  Experimental_info: Expr_pattern: Expr1054136
    Microarray_results: GPL8303_CB6_WBGene00032777_A
      GPL8303_CB6_WBGene00032777_B
      GPL14143_CBG11692_785-844_0.909_16_B
      GPL14143_CBG11692_845-904_0.851_52_C
      GPL14143_CBG11692_909-968_0.908_18_A
  Method: Gene