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WormBase Tree Display for Gene: WBGene00033041

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Name Class

WBGene00033041SMapS_parentSequencecb25.fpc2852
IdentityVersion2
NameCGC_nameCbr-ftn-2From_analysisInferred_from_orthology
Sequence_nameCBG12026
Molecular_nameCBG12026
CBG12026.1
CBP02931
Other_nameCBG_12026Accession_evidenceNDBHE601540
Public_nameCbr-ftn-2
DB_infoDatabaseNDBlocus_tagCBG_12026
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ftn-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classftn
RNASeq_FPKMWBls:00000021043.68From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
438.097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
567.689From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
683.155From_analysisRNASeq.briggsae.WBls:0000002.control_mean
602.81From_analysisRNASeq.briggsae.WBls:0000002.control_median
637.931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
671.849From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003113.686From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
148.706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
78.6656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
114.097From_analysisRNASeq.briggsae.WBls:0000003.control_mean
114.919From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004107.842From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
117.212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
98.4714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
103.019From_analysisRNASeq.briggsae.WBls:0000004.control_mean
111.785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
90.0958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
97.5325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027139.215From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
189.034From_analysisRNASeq.briggsae.WBls:0000027.control_mean
386.392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
41.4947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
262.803From_analysisRNASeq.briggsae.WBls:0000027.control_median
280.469From_analysisRNASeq.briggsae.WBls:0000027.control_mean
554.773From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035448.947From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381026.03From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
291.123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
345.43From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
406.229From_analysisRNASeq.briggsae.WBls:0000038.control_median
467.028From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
532.403From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:0000041283.008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
433.973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
443.376From_analysisRNASeq.briggsae.WBls:0000041.control_mean
476.616From_analysisRNASeq.briggsae.WBls:0000041.control_median
519.26From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
537.262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
303.223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
421.474From_analysisRNASeq.briggsae.WBls:0000041.control_mean
443.044From_analysisRNASeq.briggsae.WBls:0000041.control_median
452.116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063432.634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
449.78From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
483.712From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
510.996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
564.471From_analysisRNASeq.briggsae.WBls:0000063.control_mean
945.235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
497.354From_analysisRNASeq.briggsae.WBls:0000063.control_median
551.134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
562.248From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101436.775From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
438.097From_analysisRNASeq.briggsae.total_over_all_stages.control_median
410From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
436.035From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00136389
00136390
00136391
Ortholog (36)
ParalogWBGene00024156Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ferric iron binding activity. Predicted to be involved in intracellular iron ion homeostasis and iron ion transport. Is an ortholog of C. elegans ftn-2. In C. elegans, ftn-2 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12026
Corresponding_CDS_historyCBG12026:bp194
Corresponding_transcriptCBG12026.1
Other_sequence (131)
Experimental_infoExpr_patternExpr1063852
Microarray_resultsGPL8303_CB6_WBGene00033041_A
GPL8303_CB6_WBGene00033041_B
GPL14143_CBG12026_132-191_0.913_11_A
GPL14143_CBG12026_345-404_0.942_3_B
GPL14143_CBG12026_418-477_0.855_32_C
MethodGene