Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00033096

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00033096SMapS_parentSequencecb25.fpc2852
IdentityVersion2
NameCGC_nameCbr-suco-1From_analysisInferred_from_orthology
Sequence_nameCBG12092
Molecular_nameCBG12092
CBG12092.1
CBP30494
Other_nameCBG_12092Accession_evidenceNDBHE601540
Public_nameCbr-suco-1
DB_infoDatabaseNDBlocus_tagCBG_12092
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
209 Feb 2015 15:39:39WBPerson2970Name_changeCGC_nameCbr-suco-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsuco
RNASeq_FPKMWBls:000000232.0281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
36.1788From_analysisRNASeq.briggsae.WBls:0000002.control_mean
37.9028From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
38.6055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
36.1936From_analysisRNASeq.briggsae.WBls:0000002.control_mean
36.238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
37.0704From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000383.6907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
84.2404From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
84.7902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
82.2979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
83.5929From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000443.3075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
45.0293From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
46.7511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
40.149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
42.901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
45.0003From_analysisRNASeq.briggsae.WBls:0000004.control_mean
51.893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.766334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.9601From_analysisRNASeq.briggsae.WBls:0000027.control_mean
28.6696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.4443From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.7679From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.8179From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.1915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003519.8614From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003824.9049From_analysisRNASeq.briggsae.WBls:0000038.control_mean
25.9327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
29.5819From_analysisRNASeq.briggsae.WBls:0000038.control_median
33.2311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
33.4956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.96009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004143.6674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
57.4348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
59.0418From_analysisRNASeq.briggsae.WBls:0000041.control_mean
60.436From_analysisRNASeq.briggsae.WBls:0000041.control_median
63.4372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
71.6277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
54.147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
60.2627From_analysisRNASeq.briggsae.WBls:0000041.control_mean
71.262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006320.0327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
20.1509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
20.836From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
21.3749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
25.7414From_analysisRNASeq.briggsae.WBls:0000063.control_mean
46.3126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
21.1054From_analysisRNASeq.briggsae.WBls:0000063.control_median
27.1938From_analysisRNASeq.briggsae.WBls:0000063.control_mean
34.4555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010132.0281From_analysisRNASeq.briggsae.total_over_all_stages.control_median
34.7313From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.3467From_analysisRNASeq.briggsae.total_over_all_stages.control_median
38.0722From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Sad1 / UNC-like C-terminal and SUN domain. Is an ortholog of C. elegans suco-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12092
Corresponding_CDS_historyCBG12092:bp194
Corresponding_transcriptCBG12092.1
Other_sequenceCBC12742_1
JI165243.1
Experimental_infoExpr_patternExpr1062577
Microarray_resultsGPL8303_CB6_WBGene00033096_A
GPL8303_CB6_WBGene00033096_B
GPL14143_CBG12092_757-816_0.790_120_A
GPL14143_CBG12092_1709-1768_0.873_33_C
GPL14143_CBG12092_1764-1823_0.793_115_B
MethodGene