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WormBase Tree Display for Gene: WBGene00033171

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Name Class

WBGene00033171SMapS_parentSequencecb25.fpc2887b
IdentityVersion1
NameSequence_nameCBG12182
Molecular_nameCBG12182
CBG12182.1
CBP17466
Other_nameCBG_12182Accession_evidenceNDBHE600958
Public_nameCBG12182
DB_infoDatabaseNDBlocus_tagCBG_12182
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000281.4785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
88.3675From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
89.9212From_analysisRNASeq.briggsae.WBls:0000002.control_mean
99.9175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
110.725From_analysisRNASeq.briggsae.WBls:0000002.control_mean
173.136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
94.1425From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003131.83From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
138.725From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
145.621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
139.654From_analysisRNASeq.briggsae.WBls:0000003.control_mean
141.512From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004134.283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
138.452From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
142.621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
129.383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
141.083From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
145.329From_analysisRNASeq.briggsae.WBls:0000004.control_mean
179.275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002727.0145From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
35.2191From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.58107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
72.0616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
44.1486From_analysisRNASeq.briggsae.WBls:0000027.control_mean
48.9759From_analysisRNASeq.briggsae.WBls:0000027.control_median
70.9373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003546.0356From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038127.796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
53.3955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
55.9796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
59.7044From_analysisRNASeq.briggsae.WBls:0000038.control_median
63.4292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
75.1501From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:0000041130.415From_analysisRNASeq.briggsae.WBls:0000041.control_mean
130.68From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
145.606From_analysisRNASeq.briggsae.WBls:0000041.control_median
160.532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
168.801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
61.6449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
113.495From_analysisRNASeq.briggsae.WBls:0000041.control_median
115.976From_analysisRNASeq.briggsae.WBls:0000041.control_mean
77.8899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
96.3091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063102.17From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
106.117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
137.293From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
143.758From_analysisRNASeq.briggsae.WBls:0000063.control_mean
151.939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
221.27From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
103.497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
121.705From_analysisRNASeq.briggsae.WBls:0000063.control_median
137.048From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010197.7523From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
99.9175From_analysisRNASeq.briggsae.total_over_all_stages.control_median
102.834From_analysisRNASeq.briggsae.total_over_all_stages.control_median
103.891From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136503
00136504
00136505
Contained_in_operonCBOPA0838
Ortholog (29)
ParalogWBGene00033086Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035798Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Predicted to be involved in ribosome assembly. Predicted to be located in nucleus. Is an ortholog of C. elegans C43E11.9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12182
Corresponding_CDS_historyCBG12182:bp194
Corresponding_transcriptCBG12182.1
Other_sequence (47)
Experimental_infoExpr_patternExpr1061228
Microarray_resultsGPL8303_CB6_WBGene00033171_A
GPL8303_CB6_WBGene00033171_B
GPL14143_CBG12182_34-93_0.883_9_C
GPL14143_CBG12182_240-299_0.856_15_B
GPL14143_CBG12182_312-371_0.959_1_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene