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WormBase Tree Display for Gene: WBGene00033276

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Name Class

WBGene00033276SMapS_parentSequencecb25.fpc2887d2
IdentityVersion1
NameSequence_nameCBG12310
Molecular_nameCBG12310
CBG12310.1
CBP02978
Other_nameCBG_12310Accession_evidenceNDBHE600913
Public_nameCBG12310
DB_infoDatabaseNDBlocus_tagCBG_12310
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000244.5899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
45.2177From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
45.3785From_analysisRNASeq.briggsae.WBls:0000002.control_mean
46.328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
28.2065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
41.0855From_analysisRNASeq.briggsae.WBls:0000002.control_mean
44.9038From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003101.136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
91.9608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
96.5484From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
84.0989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
92.3986From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000447.8192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
52.7473From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
57.6754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
49.0573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
50.4938From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
52.2511From_analysisRNASeq.briggsae.WBls:0000004.control_mean
56.2096From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002713.7266From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.42653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
33.6475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.10588From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.6168From_analysisRNASeq.briggsae.WBls:0000027.control_mean
19.8767From_analysisRNASeq.briggsae.WBls:0000027.control_median
37.2871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003528.5495From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003838.5759From_analysisRNASeq.briggsae.WBls:0000038.control_mean
38.6381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
39.3205From_analysisRNASeq.briggsae.WBls:0000038.control_median
40.0029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.0838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
69.5786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004129.1593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
57.4432From_analysisRNASeq.briggsae.WBls:0000041.control_mean
59.587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
62.211From_analysisRNASeq.briggsae.WBls:0000041.control_median
64.8351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
76.1915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
40.866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
54.7627From_analysisRNASeq.briggsae.WBls:0000041.control_mean
57.9372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
58.7621From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006337.8133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
38.3588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
40.5534From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
42.6632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
50.308From_analysisRNASeq.briggsae.WBls:0000063.control_mean
92.1513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
41.6083From_analysisRNASeq.briggsae.WBls:0000063.control_median
50.9156From_analysisRNASeq.briggsae.WBls:0000063.control_mean
53.9533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010142.6632From_analysisRNASeq.briggsae.total_over_all_stages.control_median
44.5299From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
44.1302From_analysisRNASeq.briggsae.total_over_all_stages.control_median
46.0389From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136631
00136632
Ortholog (39)
Structured_descriptionAutomated_descriptionPredicted to be involved in rRNA processing. Predicted to be part of small-subunit processome. Is an ortholog of C. elegans F27C1.6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12310
Corresponding_CDS_historyCBG12310:bp194
CBG12310:bp255
Corresponding_transcriptCBG12310.1
Other_sequence (96)
Experimental_infoExpr_patternExpr1067340
Microarray_resultsGPL8303_CB6_WBGene00033276_A
GPL8303_CB6_WBGene00033276_B
GPL14143_CBG12310_485-544_0.521_284_C
GPL14143_CBG12310_1645-1704_0.917_3_B
GPL14143_CBG12310_1907-1966_0.954_1_A
MethodGene