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WormBase Tree Display for Gene: WBGene00033358

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Name Class

WBGene00033358SMapS_parentSequencecb25.fpc2887d2
IdentityVersion2
NameCGC_nameCbr-mdt-31From_analysisInferred_from_orthology
Sequence_nameCBG12403
Molecular_nameCBG12403
CBG12403.1
CBP17441
Other_nameCBG_12403Accession_evidenceNDBHE600913
Public_nameCbr-mdt-31
DB_infoDatabaseNDBlocus_tagCBG_12403
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mdt-31
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmdt
RNASeq_FPKMWBls:000000216.8199From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
19.7643From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.9503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.52259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.6028From_analysisRNASeq.briggsae.WBls:0000002.control_mean
21.9692From_analysisRNASeq.briggsae.WBls:0000002.control_median
27.1184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000345.8206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
47.0623From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
48.304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
31.2198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
41.7815From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000423.0378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.4008From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
29.7638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
22.6524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
26.7656From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
27.617From_analysisRNASeq.briggsae.WBls:0000004.control_mean
35.8653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.18From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.95404From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.96372From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.7184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
14.1487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.34106From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.50271From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003515.1308From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.459074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
11.9353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
12.4354From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.9354From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
14.4149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.93617From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004122.7955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
37.0821From_analysisRNASeq.briggsae.WBls:0000041.control_mean
39.0643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
39.7873From_analysisRNASeq.briggsae.WBls:0000041.control_median
40.5103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
45.9581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
32.7214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
39.0275From_analysisRNASeq.briggsae.WBls:0000041.control_mean
53.1157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006317.5768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
19.0413From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
21.1261From_analysisRNASeq.briggsae.WBls:0000063.control_mean
22.3864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
37.6073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.01883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
15.013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
18.309From_analysisRNASeq.briggsae.WBls:0000063.control_median
20.1073From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010115.9215From_analysisRNASeq.briggsae.total_over_all_stages.control_median
20.0853From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
18.309From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.1341From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136723
00136724
00136725
Ortholog (25)
Structured_descriptionAutomated_descriptionPredicted to enable transcription coregulator activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be part of mediator complex. Is an ortholog of C. elegans mdt-31.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12403
Corresponding_CDS_historyCBG12403:bp194
CBG12403:bp255
Corresponding_transcriptCBG12403.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1065869
Microarray_resultsGPL8303_CB6_WBGene00033358_A
GPL14143_CBG12403_139-198_0.942_3_B
GPL14143_CBG12403_278-337_0.950_2_A
GPL14143_CBG12403_322-381_0.955_1_C
MethodGene