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WormBase Tree Display for Gene: WBGene00033455

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Name Class

WBGene00033455SMapS_parentSequencecb25.fpc2888a2
IdentityVersion2
NameCGC_nameCbr-ran-4From_analysisInferred_from_orthology
Sequence_nameCBG12512
Molecular_nameCBG12512
CBG12512.1
CBP03156
Other_nameCBG_12512Accession_evidenceNDBHE600940
Public_nameCbr-ran-4
DB_infoDatabaseNDBlocus_tagCBG_12512
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ran-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classran
RNASeq_FPKMWBls:0000002139.55From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
139.672From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
149.404From_analysisRNASeq.briggsae.WBls:0000002.control_mean
168.991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
147.596From_analysisRNASeq.briggsae.WBls:0000002.control_median
150.934From_analysisRNASeq.briggsae.WBls:0000002.control_mean
155.521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003277.206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
289.319From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
301.431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
241.787From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
273.475From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004197.89From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
203.945From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
210From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
127.191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
194.971From_analysisRNASeq.briggsae.WBls:0000004.control_mean
209.463From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
230.309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027103.315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
14.0322From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
41.416From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.90087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
32.8215From_analysisRNASeq.briggsae.WBls:0000027.control_median
43.9647From_analysisRNASeq.briggsae.WBls:0000027.control_mean
51.6108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003574.8703From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038157.763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
30.4266From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
69.7035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
84.2207From_analysisRNASeq.briggsae.WBls:0000038.control_median
89.1578From_analysisRNASeq.briggsae.WBls:0000038.control_mean
98.7379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041105.144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
190.497From_analysisRNASeq.briggsae.WBls:0000041.control_mean
214.871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
216.689From_analysisRNASeq.briggsae.WBls:0000041.control_median
218.508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
223.464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
117.641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
125.444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
167.512From_analysisRNASeq.briggsae.WBls:0000041.control_mean
170.158From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063112.427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
126.891From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
127.473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
147.327From_analysisRNASeq.briggsae.WBls:0000063.control_mean
291.84From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
78.0042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
127.182From_analysisRNASeq.briggsae.WBls:0000063.control_median
144.722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
146.893From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101126.891From_analysisRNASeq.briggsae.total_over_all_stages.control_median
134.764From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
127.332From_analysisRNASeq.briggsae.total_over_all_stages.control_median
139.785From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (27)
ParalogWBGene00026937Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Nuclear transport factor 2 (NTF2) domain; NTF2-like domain superfamily; and Nuclear transport factor 2 domain. Is an ortholog of C. elegans ran-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12512
Corresponding_CDS_historyCBG12512:bp194
Corresponding_transcriptCBG12512.1
Other_sequence (74)
Experimental_infoExpr_patternExpr1064492
Microarray_resultsGPL8303_CB6_WBGene00033455_A
GPL8303_CB6_WBGene00033455_B
GPL8303_CB6_WBGene00033455_C
GPL14143_CBG12512_127-186_0.837_5_B
GPL14143_CBG12512_213-272_0.617_28_A
GPL14143_CBG12512_326-385_0.932_1_C
MethodGene