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WormBase Tree Display for Gene: WBGene00033557

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Name Class

WBGene00033557SMapS_parentSequencecb25.fpc2888a2
IdentityVersion2
NameCGC_nameCbr-sulp-1From_analysisInferred_from_orthology
Sequence_nameCBG12639
Molecular_nameCBG12639a
CBG12639a.1
CBP41982
CBG12639b
CBP41128
CBG12639b.1
Other_nameCBG_12639Accession_evidenceNDBHE600940
Public_nameCbr-sulp-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-sulp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsulp
RNASeq_FPKMWBls:00000020.227978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.696052From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.820568From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.03961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.605082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.67331From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.712825From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.068342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.137197From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.206052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.091465From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.491675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.835038From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.1784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.375629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.770161From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.826367From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.978734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.055992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.467312From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.951911From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.33243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.26557From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.33692From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.20653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.54479From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.172241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.726736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.740471From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.754207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.792936From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.51856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.109718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.110814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.179715From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.248616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.394295From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.10803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.578323From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.659816From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.90803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.47369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.182073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.253062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.316065From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.342508From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.34661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.456073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.341586From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.344559From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.469188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.467312From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.01383From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.548379From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.980115From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136956
00136957
Ortholog (29)
ParalogWBGene00035122Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035342Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037061Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038579Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041248Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041629Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041630Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans sulp-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12639a
CBG12639b
Corresponding_CDS_historyCBG12639:bp194
CBG12639:bp255
Corresponding_transcriptCBG12639a.1
CBG12639b.1
Other_sequenceCJC00607_1
Experimental_infoExpr_patternExpr1064530
Microarray_resultsGPL8303_CB6_WBGene00033557_A
GPL8303_CB6_WBGene00033557_B
GPL14143_CBG12639_1281-1340_0.739_124_B
GPL14143_CBG12639_1569-1628_0.804_64_A
GPL14143_CBG12639_1755-1814_0.886_10_C
MethodGene