WormBase Tree Display for Gene: WBGene00033632

WBGene00033632 SMap: S_parent: Sequence: cb25.fpc2888a2
  Identity: Version: 2
    Name: CGC_name: Cbr-sod-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG12726
      Molecular_name: CBG12726
        CBG12726.1
        CBP29517
      Other_name: CBG_12726 Accession_evidence: NDB HE600940
      Public_name: Cbr-sod-2
    DB_info: Database: NDB locus_tag CBG_12726
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:03 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-sod-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sod
    RNASeq_FPKM: WBls:0000002 111.74 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        78.263 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        95.7573 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        97.2689 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        101.813 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        106.358 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        98.4075 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 35.8815 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        46.7357 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        57.5899 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        48.1557 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        50.9957 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 52.3931 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        54.1383 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        55.8835 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        47.2222 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        51.4752 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        51.8347 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        52.1993 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 32.5139 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        41.7503 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        84.2386 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        8.49834 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        50.1816 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        53.9948 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        75.4757 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 90.9895 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 106.258 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        110.34 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        113.752 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        117.164 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        122.371 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        75.1592 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 101.911 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        106.044 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        135.617 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        89.4334 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        97.2156 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        99.5633 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        117.148 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        118.764 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        138.288 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        140.426 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 156.027 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        75.3475 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        76.6235 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        77.0827 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        82.7461 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        93.5654 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        106.677 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        79.9144 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        95.7506 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 81.5081 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        82.7461 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        80.5045 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        82.4435 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00137043
      00137044
      00137045
    Contained_in_operon: CBOPA0378
    Ortholog (28)
    Structured_description: Automated_description: Predicted to enable metal ion binding activity and superoxide dismutase activity. Predicted to be involved in superoxide metabolic process. Is an ortholog of C. elegans sod-2. In C. elegans, sod-2 is involved in removal of superoxide radicals. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG12726
    Corresponding_CDS_history: CBG12726:bp194
    Corresponding_transcript: CBG12726.1
    Other_sequence (134)
  Experimental_info: Expr_pattern: Expr1051066
    Microarray_results: GPL8303_CB6_WBGene00033632_A
      GPL8303_CB6_WBGene00033632_B
      GPL14143_CBG12726_419-478_0.799_31_C
      GPL14143_CBG12726_456-515_0.851_16_B
      GPL14143_CBG12726_556-615_0.940_1_A
  Method: Gene