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WormBase Tree Display for Gene: WBGene00033874

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Name Class

WBGene00033874SMapS_parentSequencecb25.fpc2888c
IdentityVersion2
NameCGC_nameCbr-cah-2From_analysisInferred_from_orthology
Sequence_nameCBG13040
Molecular_nameCBG13040a
CBG13040a.1
CBP37316
CBG13040b
CBP47240
CBG13040b.1
Other_nameCBG_13040Accession_evidenceNDBHE600938
Public_nameCbr-cah-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cah-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcah
AlleleWBVar00014922
RNASeq_FPKMWBls:00000022.61051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.4138From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.45298From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.1779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.24967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.03174From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.12277From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.133695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.606302From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.07891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.745558From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.02407From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000046.19076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
7.06699From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.94321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
6.84422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.46027From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
7.58596From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.49134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.41196From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.41627From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.83685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.6244From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.79087From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.91469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.05442From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.859183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.33509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.9258From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.06689From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.5165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.55678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.34224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.490323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.611539From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.732756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.81119From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.67944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.2061From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.33273From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.98701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.76458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.728807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.818832From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.866272From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.16919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.61453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.973833From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.994011From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.51164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.67944From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.37305From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.29238From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.65963From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00137294
00137295
Ortholog (32)
ParalogWBGene00029482Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032185Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033006Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036319Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041439Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbonate dehydratase activity and zinc ion binding activity. Is an ortholog of C. elegans cah-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13040a
CBG13040b
Corresponding_CDS_historyCBG13040:bp194
Corresponding_transcriptCBG13040a.1
CBG13040b.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1067989
Microarray_resultsGPL8303_CB6_WBGene00033874_A
GPL8303_CB6_WBGene00033874_B
GPL14143_CBG13040_237-296_0.502_139_C
GPL14143_CBG13040_354-413_0.836_11_A
GPL14143_CBG13040_395-454_0.814_20_B
MethodGene