WormBase Tree Display for Gene: WBGene00034093

WBGene00034093 SMap: S_parent: Sequence: cb25.fpc2976
  Identity: Version: 1
    Name: CGC_name: Cbr-znf-593.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG13314
      Molecular_name: CBG13314
        CBG13314.1
        CBP09294
      Other_name: CBG_13314 Accession_evidence: NDB HE601226
      Public_name: CBG13314
    DB_info: Database: NDB locus_tag CBG_13314
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:03 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbr-znf-593.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: znf
    RNASeq_FPKM: WBls:0000002 0.000198 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
            RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        6.6e-05 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.000101 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.000206 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        9.9e-05 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
            RNASeq.briggsae.WBls:0000003.control_mean
        1e-06 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.000303 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        6.1e-05 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 0 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        136.212 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        27.7523 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        306.669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        6.93808 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        73.8157 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        103.935 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        308.82 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        389.48 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
      WBls:0000027 0.05062 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        1.43873 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.26556 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        2.15809 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        23.1168 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        6.85824 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 5.01377 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.000278 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.350277 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.700276 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        14.2141 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        3.72866 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 0.05034 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.201347 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        3e-06 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        4e-06 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        5e-06 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        6e-06 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.00031 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.000614 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        43.0516 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        7.20893 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        3.3e-05 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        7e-06 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        6e-06 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 1.79995 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.11495 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (28)
    Paralog: WBGene00030157 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034091 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034098 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger C2H2 superfamily; Zinc-finger double-stranded RNA-binding; and Zinc finger, double-stranded RNA binding. Is an ortholog of C. elegans znf-593. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG13314
    Corresponding_CDS_history: CBG13314:bp194
    Corresponding_transcript: CBG13314.1
    Other_sequence: Tcol_isotig20334
  Experimental_info: Expr_pattern: Expr1057914
    Microarray_results: GPL8303_CB6_WBGene00034093_A
      GPL8303_CB6_WBGene00034093_B
      GPL8303_CB6_WBGene00034098_A
      GPL8303_CB6_WBGene00034098_B
      GPL14143_CBG13314_39-98_0.885_8_B
      GPL14143_CBG13314_163-222_0.921_2_C
      GPL14143_CBG13314_237-296_0.921_1_A
  Method: Gene