WormBase Tree Display for Gene: WBGene00034299

WBGene00034299 SMap: S_parent: Sequence: cb25.fpc3052b
  Identity: Version: 3
    Name: CGC_name: Cbr-ears-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG13545
      Molecular_name: CBG13545
        CBG13545.1
        CBP41649
      Other_name: Cbr-ers-3 From_analysis: Inferred_from_orthology
        CBG_13545 Accession_evidence: NDB HE600980
      Public_name: Cbr-ears-2
    DB_info: Database: NDB locus_tag CBG_13545
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:03 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-ers-3
        3 29 Jan 2010 10:38:19 WBPerson2970 Name_change: CGC_name: Cbr-ears-2
                Other_name: Cbr-ers-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ears
    RNASeq_FPKM: WBls:0000002 12.7085 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        4.07458 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        6.95456 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        7.91255 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        11.0166 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        8.68856 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        8.98558 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.952619 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        1.32896 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        1.70529 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        1.52563 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        1.91898 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 1.33542 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        1.82475 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        2.31407 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        2.55522 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        2.6868 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        3.07837 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        3.36143 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 0.888909 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        2.8166 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        7.5609 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.87751 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.82898 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.86611 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 4.22284 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.1975 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1.91166 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        3.26717 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        4.2661 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        5.26502 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        5.66034 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 11.0315 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        16.0043 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        16.7802 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        17.3701 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        17.96 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        18.2454 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        13.5665 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        16.0352 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        18.6279 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 10.2275 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        11.6064 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        11.7409 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        8.61026 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        9.47652 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        8.52367 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        8.59583 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        9.85201 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 4.22284 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.44995 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        4.16544 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.64987 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00137804
      00137805
      00137806
      00137807
      00137808
      00137809
      00137810
    Ortholog (30)
    Paralog: WBGene00034482 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040150 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; glutamate-tRNA ligase activity; and tRNA binding activity. Predicted to be involved in glutamyl-tRNA aminoacylation. Is an ortholog of C. elegans ears-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG13545
    Corresponding_CDS_history: CBG13545:bp194
      CBG13545:bp255
    Corresponding_transcript: CBG13545.1
    Other_sequence (20)
  Experimental_info: Expr_pattern: Expr1057582
    Microarray_results: GPL8303_CB6_WBGene00034299_A
      GPL8303_CB6_WBGene00034299_B
      GPL14143_CBG13545_686-745_0.902_23_C
      GPL14143_CBG13545_764-823_0.920_14_A
      GPL14143_CBG13545_1284-1343_0.949_1_B
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_downregulated
  Method: Gene