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WormBase Tree Display for Gene: WBGene00034319

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Name Class

WBGene00034319SMapS_parentSequencecb25.fpc3052b
IdentityVersion2
NameCGC_nameCbr-set-23From_analysisInferred_from_orthology
Sequence_nameCBG13569
Molecular_nameCBG13569
CBG13569.1
CBP17827
Other_nameCBG_13569Accession_evidenceNDBHE600980
Public_nameCbr-set-23
DB_infoDatabaseNDBlocus_tagCBG_13569
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-set-23
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:000000210.0798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
9.65839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.87243From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.87909From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.7714From_analysisRNASeq.briggsae.WBls:0000002.control_mean
13.4684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.97945From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000315.8792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
16.2929From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
16.7065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
13.9168From_analysisRNASeq.briggsae.WBls:0000003.control_mean
9.16467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000412.4702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
12.951From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
13.4319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
13.0589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
13.9799From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.7817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
16.1569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.24646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.417409From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.01458From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.37988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.13843From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.7258From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.85944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.3922From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.954258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
13.7111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.75235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.30712From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.8199From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.86189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004113.2177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
23.5082From_analysisRNASeq.briggsae.WBls:0000041.control_mean
26.2535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
26.4268From_analysisRNASeq.briggsae.WBls:0000041.control_median
26.6From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
27.9615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
13.9159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
21.7563From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.5894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
24.4214From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.53632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.60116From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.19097From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.50318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.77533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
10.429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.57247From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.84707From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001016.85455From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.20661From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.1688From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.41153From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (41)
Paralog (35)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: SET domain. Is an ortholog of C. elegans set-23.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13569
Corresponding_CDS_historyCBG13569:bp194
Corresponding_transcriptCBG13569.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1054006
Microarray_resultsGPL8303_CB6_WBGene00034319_A
GPL8303_CB6_WBGene00034319_B
GPL8303_CB6_WBGene00034319_C
GPL14143_CBG13569_184-243_0.924_17_C
GPL14143_CBG13569_464-523_0.920_18_B
GPL14143_CBG13569_608-667_0.972_1_A
MethodGene