WormBase Tree Display for Gene: WBGene00034614

WBGene00034614 SMap: S_parent: Sequence: cb25.fpc3835
  Identity: Version: 3
    Name: CGC_name: Cbr-mdt-20 From_analysis: Inferred_from_orthology
      Sequence_name: CBG13937
      Molecular_name: CBG13937
        CBG13937.1
        CBP09544
      Other_name: CBG_13937 Accession_evidence: NDB HE601467
      Public_name: Cbr-mdt-20
    DB_info: Database: NDB locus_tag CBG_13937
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-mdt-20
        3 24 Jul 2008 11:56:36 WBPerson1847 Event: Acquires_merge: WBGene00034613
      Acquires_merge: WBGene00034613
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    RNASeq_FPKM: WBls:0000002 31.1894 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        33.4268 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        33.741 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        35.35 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        34.5455 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        37.7422 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        50.6884 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 57.1785 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        62.9425 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        68.7064 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        63.0405 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        63.2365 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 55.8284 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        60.948 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        66.0676 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        46.2031 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        57.7943 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        59.0671 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        69.4422 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 10.3337 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        10.7365 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        18.8793 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.99656 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        13.8283 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        14.6065 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        23.1035 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 15.3697 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.2315 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        21.3237 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        21.6184 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        23.8652 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        26.4068 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        27.5115 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 30.1776 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        36.0391 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        37.1714 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        37.2413 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        37.3112 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        39.4961 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        34.9411 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        36.5582 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        40.2519 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 19.6606 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        20.0865 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        20.5879 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        23.2047 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        34.4238 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        21.7694 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        21.8963 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        32.3137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 27.3649 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        28.9269 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        31.7516 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        33.0751 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00138096
      00138097
      00138098
    Ortholog (25)
    Structured_description: Automated_description: Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex. Is an ortholog of C. elegans mdt-20. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG13937
    Corresponding_CDS_history: CBG13937:bp194
      CBG13937:bp207
    Corresponding_transcript: CBG13937.1
    Other_sequence: Acan_isotig13089
      HC08193
      HC01404
      HCC05003_1
      HCC10900_1
      Oden_isotig15514
      Tcol_isotig12442
      Oden_isotig15513
  Experimental_info: Microarray_results: GPL8303_CB6_WBGene00034614_A
      GPL8303_CB6_WBGene00034614_B
  Method: Gene