WormBase Tree Display for Gene: WBGene00034700

WBGene00034700 SMap: S_parent: Sequence: cb25.fpc3857a
  Identity: Version: 2
    Name: CGC_name: Cbr-npax-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG14076
      Molecular_name: CBG14076
        CBG14076.1
        CBP39964
      Other_name: CBG_14076 Accession_evidence: NDB HE600983
      Public_name: Cbr-npax-2
    DB_info: Database: NDB locus_tag CBG_14076
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 28 May 2010 15:36:21 WBPerson2970 Name_change: CGC_name: Cbr-npax-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: npax
    RNASeq_FPKM: WBls:0000002 0.846361 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.3356 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.48087 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        2.26064 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.946954 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.14128 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.34739 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.25639 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.95051 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        1.64463 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.962004 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.984992 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 3.84127 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        5.3501 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        6.85894 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        3.05555 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        5.23161 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        5.56223 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        6.84004 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 1.25674 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        1.39993 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        1.50666 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        1.58502 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        1.65694 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        1.67371 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        1.84076 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        1.88043 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        0.815514 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
      WBls:0000027 1.33215 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.80399 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        4.07981 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.70367 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.70598 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        5.40272 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 1.17034 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.515805 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.998024 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        12.9997 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        1.39306 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.7881 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        4.07541 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 0.272225 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.537657 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.607403 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.677149 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.07182 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.80024 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.958019 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.22443 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.23889 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        1.82041 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.651358 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.745153 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.875347 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.19906 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.49757 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.574464 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.703889 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 1.33215 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.88168 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        1.33387 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.12942 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00138183
      00138184
    Ortholog (23)
    Paralog (20)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans npax-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG14076
    Corresponding_CDS_history: CBG14076:bp194
      CBG14076:bp255
    Corresponding_transcript: CBG14076.1
    Other_sequence: JI175891.1
      JI461007.1
      HG00866
      Dviv_isotig19041
      OOC03437_1
      TCC00528_1
      Dviv_isotig19042
      HG11404
      TX02063
      HGC02025_1
  Experimental_info: Expr_pattern: Expr1063139
    Microarray_results: GPL8303_CB6_WBGene00034700_A
      GPL14143_CBG14076_351-410_0.876_5_B
      GPL14143_CBG14076_437-496_0.867_6_C
      GPL14143_CBG14076_516-575_0.888_1_A
  Method: Gene