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WormBase Tree Display for Gene: WBGene00035102

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Name Class

WBGene00035102SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-scav-1From_analysisInferred_from_orthology
Sequence_nameCBG14680
Molecular_nameCBG14680
CBG14680.1
CBP18235
Other_nameCBG_14680Accession_evidenceNDBHE600983
Public_nameCbr-scav-1
DB_infoDatabaseNDBlocus_tagCBG_14680
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
208 Mar 2010 13:33:58WBPerson2970Name_changeCGC_nameCbr-scav-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classscav
RNASeq_FPKMWBls:000000221.5321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
33.7809From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
40.9151From_analysisRNASeq.briggsae.WBls:0000002.control_mean
67.4323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
23.405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
28.593From_analysisRNASeq.briggsae.WBls:0000002.control_median
36.5376From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.084894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.16531From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.24573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.42623From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.94806From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000419.0524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
19.2894From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
19.5264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
17.7191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
17.7399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
18.7635From_analysisRNASeq.briggsae.WBls:0000004.control_mean
19.7795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.46961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.9453From_analysisRNASeq.briggsae.WBls:0000027.control_mean
38.7927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.57359From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.9216From_analysisRNASeq.briggsae.WBls:0000027.control_median
15.5264From_analysisRNASeq.briggsae.WBls:0000027.control_mean
17.2696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003526.9696From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.9143From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
20.2472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
21.8601From_analysisRNASeq.briggsae.WBls:0000038.control_median
23.4731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
34.6876From_analysisRNASeq.briggsae.WBls:0000038.control_mean
80.116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004119.9896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
20.7438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
21.7526From_analysisRNASeq.briggsae.WBls:0000041.control_median
22.6982From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.7615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
27.298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
16.7959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
21.8874From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.7359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
40.4From_analysisRNASeq.briggsae.WBls:0000063.control_mean
49.1694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
50.4312From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
50.9431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
51.4565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
27.4004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
38.2334From_analysisRNASeq.briggsae.WBls:0000063.control_mean
49.8003From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010123.4731From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.3885From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
22.1468From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.7911From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138607
Ortholog (23)
ParalogWBGene00025076Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032777Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032955Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035617Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036715Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans scav-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14680
Corresponding_CDS_historyCBG14680:bp194
Corresponding_transcriptCBG14680.1
Other_sequence (15)
Experimental_infoExpr_patternExpr1060398
Microarray_resultsGPL8303_CB6_WBGene00035102_A
GPL8303_CB6_WBGene00035102_B
GPL14143_CBG14680_1075-1134_0.758_27_C
GPL14143_CBG14680_1208-1267_0.708_68_A
GPL14143_CBG14680_1528-1587_0.735_47_B
MethodGene