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WormBase Tree Display for Gene: WBGene00035110

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Name Class

WBGene00035110SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-dpyd-1From_analysisInferred_from_orthology
Sequence_nameCBG14689
Molecular_nameCBG14689
CBG14689.1
CBP49349
Other_nameCBG_14689Accession_evidenceNDBHE600983
Public_nameCbr-dpyd-1
DB_infoDatabaseNDBlocus_tagCBG_14689
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-dpyd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpyd
RNASeq_FPKMWBls:000000226.7305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
45.4758From_analysisRNASeq.briggsae.WBls:0000002.control_mean
50.8102From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
58.8866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.14From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
37.1418From_analysisRNASeq.briggsae.WBls:0000002.control_mean
38.7704From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000320.6202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
25.1937From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
29.7672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
24.6514From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
25.0129From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000433.6927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
33.8601From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
34.0276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
31.9762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
32.5136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
33.4096From_analysisRNASeq.briggsae.WBls:0000004.control_mean
34.8381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002718.5828From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
23.432From_analysisRNASeq.briggsae.WBls:0000027.control_mean
46.7682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.94494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
29.489From_analysisRNASeq.briggsae.WBls:0000027.control_mean
32.6755From_analysisRNASeq.briggsae.WBls:0000027.control_median
47.6599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003542.6668From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003835.7969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
39.1266From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
42.6261From_analysisRNASeq.briggsae.WBls:0000038.control_median
46.1256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
49.4673From_analysisRNASeq.briggsae.WBls:0000038.control_mean
76.8199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004129.8747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
37.2244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
37.4128From_analysisRNASeq.briggsae.WBls:0000041.control_mean
38.7841From_analysisRNASeq.briggsae.WBls:0000041.control_median
40.3438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
42.2085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
27.9534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
29.7721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
33.5495From_analysisRNASeq.briggsae.WBls:0000041.control_median
34.5628From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
44.9414From_analysisRNASeq.briggsae.WBls:0000063.control_mean
54.8085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
55.4642From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
56.5218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
57.9123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
37.3939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
43.6834From_analysisRNASeq.briggsae.WBls:0000063.control_mean
55.1363From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010140.3438From_analysisRNASeq.briggsae.total_over_all_stages.control_median
46.376From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
37.3092From_analysisRNASeq.briggsae.total_over_all_stages.control_median
42.7317From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138615
00138616
00138617
00138618
Ortholog (27)
ParalogWBGene00024968Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025132Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026793Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable iron-sulfur cluster binding activity and oxidoreductase activity, acting on the CH-CH group of donors. Predicted to be located in cytoplasm. Is an ortholog of C. elegans dpyd-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14689
Corresponding_CDS_historyCBG14689:bp194
CBG14689:bp266
Corresponding_transcriptCBG14689.1
Other_sequence (75)
Experimental_infoExpr_patternExpr1066603
Microarray_resultsGPL8303_CB6_WBGene00035110_A
GPL14143_CBG14689_2317-2376_0.792_12_C
GPL14143_CBG14689_2764-2823_0.797_9_A
GPL14143_CBG14689_2903-2962_0.762_52_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene