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WormBase Tree Display for Gene: WBGene00035111

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Name Class

WBGene00035111SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-dlg-1From_analysisInferred_from_orthology
Sequence_nameCBG14691
Molecular_nameCBG14691
CBG14691.1
CBP46255
Other_nameCBG_14691Accession_evidenceNDBHE600983
Public_nameCbr-dlg-1
DB_infoDatabaseNDBlocus_tagCBG_14691
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-dlg-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdlg
RNASeq_FPKMWBls:000000225.7163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
29.6612From_analysisRNASeq.briggsae.WBls:0000002.control_mean
31.0343From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
32.2329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
18.1053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
26.7722From_analysisRNASeq.briggsae.WBls:0000002.control_mean
28.3753From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000344.6083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
50.229From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
55.8498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
41.5195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
47.3259From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004224.959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
226.225From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
227.492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
220.406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
230.029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
234.311From_analysisRNASeq.briggsae.WBls:0000004.control_mean
268.67From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002714.2765From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
26.9358From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.87192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
60.6591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
37.4678From_analysisRNASeq.briggsae.WBls:0000027.control_median
37.8082From_analysisRNASeq.briggsae.WBls:0000027.control_mean
70.4254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003570.7686From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.5011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
31.2253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
32.7425From_analysisRNASeq.briggsae.WBls:0000038.control_median
34.2596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
37.5387From_analysisRNASeq.briggsae.WBls:0000038.control_mean
68.1688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
11.9417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
12.7128From_analysisRNASeq.briggsae.WBls:0000041.control_median
13.4838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
14.1801From_analysisRNASeq.briggsae.WBls:0000041.control_mean
20.938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
14.745From_analysisRNASeq.briggsae.WBls:0000041.control_median
15.3059From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.0062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
19.1084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006311.9956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
12.061From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
12.4022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
13.165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.92476From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.8435From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.2316From_analysisRNASeq.briggsae.WBls:0000063.control_median
15.437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010131.0343From_analysisRNASeq.briggsae.total_over_all_stages.control_median
45.7329From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
31.1298From_analysisRNASeq.briggsae.total_over_all_stages.control_median
58.5779From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (33)
ParalogWBGene00026735Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: L27-1; SH3-like domain superfamily; L27_1; SH3 domain; L27 domain; L27 domain superfamily; Guanylate kinase/L-type calcium channel beta subunit; P-loop containing nucleoside triphosphate hydrolase; PDZ superfamily; Guanylate kinase; and PDZ domain. Is an ortholog of C. elegans dlg-1. In C. elegans, dlg-1 is involved in embryo development and zonula adherens assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14691
Corresponding_CDS_historyCBG14691:bp194
CBG14691:bp195
CBG14691:bp255
Corresponding_transcriptCBG14691.1
Other_sequence (86)
Experimental_infoExpr_patternExpr1066751
Microarray_resultsGPL8303_CB6_WBGene00035111_A
GPL8303_CB6_WBGene00035111_B
GPL14143_CBG14691_2538-2597_0.810_4_B
GPL14143_CBG14691_2715-2774_0.723_161_C
GPL14143_CBG14691_2880-2939_0.797_14_A
MethodGene