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WormBase Tree Display for Gene: WBGene00035122

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Name Class

WBGene00035122SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-sulp-2From_analysisInferred_from_orthology
Sequence_nameCBG14706
Molecular_nameCBG14706
CBG14706.1
CBP42413
Other_nameCBG_14706Accession_evidenceNDBHE600983
Public_nameCbr-sulp-2
DB_infoDatabaseNDBlocus_tagCBG_14706
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-sulp-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsulp
RNASeq_FPKMWBls:00000022.16759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.90229From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.92421From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.70275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.686547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.53494From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.11479From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.074428From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.148857From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.037103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.040407From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.079353From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.170399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.421619From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.95222From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.43504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.779384From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.998452From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.13715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.46937From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.194286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.16943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.97945From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.78947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.979From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.76281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.816781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.36158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.88068From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.99745From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.39978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.41165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
10.1147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.90571From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.68089From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.98083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.229932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.492661From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.657396From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.751301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.824674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.704349From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.12783From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.30366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.17109From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.48106From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.980912From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.43215From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138624
00138625
Ortholog (24)
ParalogWBGene00033557Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035342Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037061Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038579Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041248Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041629Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041630Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans sulp-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14706
Corresponding_CDS_historyCBG14706:bp255
Corresponding_transcriptCBG14706.1
Other_sequenceCJC12795_1
Experimental_infoExpr_patternExpr1064877
Microarray_resultsGPL8303_CB6_WBGene00035122_A
GPL8303_CB6_WBGene00035122_B
GPL14143_CBG14706_1341-1400_0.689_100_C
GPL14143_CBG14706_1906-1965_0.771_32_B
GPL14143_CBG14706_2004-2063_0.551_205_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene