WormBase Tree Display for Gene: WBGene00035915

WBGene00035915 SMap: S_parent: Sequence: cb25.fpc4030a2
  Identity: Version: 2
    Name: CGC_name: Cbr-ubq-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG15773
      Molecular_name: CBG15773
        CBG15773.1
        CBP03773
      Other_name: CBG_15773 Accession_evidence: NDB HE600979
      Public_name: Cbr-ubq-2
    DB_info: Database: NDB locus_tag CBG_15773
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:05 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-ubq-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ubq
    RNASeq_FPKM: WBls:0000002 3244.36 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        3688.84 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        3748.29 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        4073.86 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        3911.07 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        4421.34 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        6618.85 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 518.939 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        555.879 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        592.819 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        490.856 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        534.205 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 1372.49 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        1373.9 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        1375.3 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        1219.34 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        1381.58 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        1506.06 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        2181.6 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 1256.73 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        1986.92 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2256.79 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        2447.23 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2352.01 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2444.55 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3817.44 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 4346.38 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 3177.93 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        4016.91 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        4107.51 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        4198.11 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        4655.92 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        7230.74 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 2727.15 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        2736.44 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2818.49 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2900.53 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        2937.01 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3383.94 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        2819.09 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        2859.81 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3039.73 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3671.24 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 2213.5 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        2289.57 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2436.41 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        2908.55 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3771.42 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        3831.85 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2845.13 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        2966.1 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3253.85 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 3144.46 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        3177.93 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3039.23 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3069.56 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00139377
      00139378
      00139379
    Ortholog (26)
    Paralog: WBGene00030704 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033773 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041019 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans ubq-2. In C. elegans, ubq-2 is involved in polarity specification of anterior/posterior axis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG15773
    Corresponding_transcript: CBG15773.1
    Other_sequence (324)
  Experimental_info: Expr_pattern: Expr1070004
    Microarray_results: GPL8303_CB6_WBGene00035915_A
      GPL8303_CB6_WBGene00035915_B
      GPL14143_CBG15773_53-112_0.947_1_A
      GPL14143_CBG15773_251-310_0.904_8_B
      GPL14143_CBG15773_319-378_0.918_4_C
  Method: Gene