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WormBase Tree Display for Gene: WBGene00036025

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Name Class

WBGene00036025SMapS_parentSequencecb25.fpc4033a
IdentityVersion2
NameCGC_nameCbr-crb-1From_analysisInferred_from_orthology
Sequence_nameCBG15921
Molecular_nameCBG15921
CBG15921.1
CBP42843
Other_nameCBG_15921Accession_evidenceNDBHE600995
Public_nameCbr-crb-1
DB_infoDatabaseNDBlocus_tagCBG_15921
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-crb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcrb
AlleleWBVar00123451
WBVar00123449
WBVar00123450
RNASeq_FPKMWBls:00000020.279711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.50831From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.0975From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.14771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.560533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.27136From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.32902From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000034.39764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
5.84079From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.28393From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.98696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
5.22284From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000420.2789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
20.4919From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
20.705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
17.6157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
19.9505From_analysisRNASeq.briggsae.WBls:0000004.control_mean
20.2816From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
20.8713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.451001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.811634From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.07946From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.97576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.90602From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.00041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
3.0597From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000354.22236From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.34649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.15215From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.34528From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.53841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.95608From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.78729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.297026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.310004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.406231From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.452866From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.502458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.701976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.422545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.462501From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.498015From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.75408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.149948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.195127From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.216754From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.244782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.493912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.176592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.18586From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.21006From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.811634From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.93607From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.84492From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.02146From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139429
Ortholog (27)
ParalogWBGene00023771Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00023835Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027820Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036582Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans crb-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15921
Corresponding_CDS_historyCBG15921:bp194
CBG15921:bp255
Corresponding_transcriptCBG15921.1
Other_sequenceAcan_isotig02259
Acan_isotig02261
Acan_isotig02260
Experimental_infoExpr_patternExpr1070177
Microarray_resultsGPL8303_CB6_WBGene00036025_A
GPL8303_CB6_WBGene00036025_B
GPL14143_CBG15921_4617-4676_0.789_54_C
GPL14143_CBG15921_4681-4740_0.804_7_B
GPL14143_CBG15921_5114-5173_0.749_230_A
MethodGene