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WormBase Tree Display for Gene: WBGene00036437

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Name Class

WBGene00036437SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-mdt-11From_analysisInferred_from_orthology
Sequence_nameCBG16524
Molecular_nameCBG16524
CBG16524.1
CBP37581
Other_nameCBG_16524Accession_evidenceNDBHE600949
Public_nameCbr-mdt-11
DB_infoDatabaseNDBlocus_tagCBG_16524
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mdt-11
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmdt
RNASeq_FPKMWBls:000000232.9864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
35.7176From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
40.4819From_analysisRNASeq.briggsae.WBls:0000002.control_mean
52.7416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
44.2296From_analysisRNASeq.briggsae.WBls:0000002.control_median
50.4448From_analysisRNASeq.briggsae.WBls:0000002.control_mean
80.3335From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003100.384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
111.856From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
123.328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
72.1583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
98.6234From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000438.2489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
40.9056From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
43.5623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
36.0015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
46.9675From_analysisRNASeq.briggsae.WBls:0000004.control_mean
49.2498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
67.7748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.4639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.02603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.28323From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.59105From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.6621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.37357From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.35882From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003514.3347From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.1654From_analysisRNASeq.briggsae.WBls:0000038.control_mean
15.7142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
18.1347From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.5552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
21.3101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.08198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004132.9112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
80.0415From_analysisRNASeq.briggsae.WBls:0000041.control_mean
93.2866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
94.8433From_analysisRNASeq.briggsae.WBls:0000041.control_median
96.4From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
97.568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
45.8249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
57.1294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
70.52From_analysisRNASeq.briggsae.WBls:0000041.control_mean
75.208From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006323.3891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
26.0876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
26.1094From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
28.7508From_analysisRNASeq.briggsae.WBls:0000063.control_mean
33.7121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
34.456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
28.007From_analysisRNASeq.briggsae.WBls:0000063.control_median
28.9431From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.9046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010126.0876From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.2289From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
32.9488From_analysisRNASeq.briggsae.total_over_all_stages.control_median
39.7284From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139846
00139847
00139848
Ortholog (16)
Structured_descriptionAutomated_descriptionPredicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex. Is an ortholog of C. elegans mdt-11.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16524
Corresponding_CDS_historyCBG16524:bp207
Corresponding_transcriptCBG16524.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1063184
Microarray_resultsGPL8303_CB6_WBGene00036437_A
GPL14143_CBG16524_393-452_0.926_8_B
GPL14143_CBG16524_509-568_0.924_9_A
GPL14143_CBG16524_698-757_0.964_1_C
MethodGene