Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00036648

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00036648SMapS_parentSequencecb25.fpc4044c
IdentityVersion2
NameCGC_nameCbr-trap-3From_analysisInferred_from_orthology
Sequence_nameCBG16815
Molecular_nameCBG16815
CBG16815.1
CBP10347
Other_nameCBG_16815Accession_evidenceNDBHE600944
Public_nameCbr-trap-3
DB_infoDatabaseNDBlocus_tagCBG_16815
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
230 Oct 2007 15:15:22WBPerson2970Name_changeCGC_nameCbr-trap-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtrap
AlleleWBVar00124327
WBVar00124328
WBVar00124329
WBVar00124330
RNASeq_FPKMWBls:0000002279.405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
321.976From_analysisRNASeq.briggsae.WBls:0000002.control_mean
322.939From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
363.583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
251.328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
301.172From_analysisRNASeq.briggsae.WBls:0000002.control_median
304.314From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003333.766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
390.555From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
447.344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
352.34From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
377.817From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004565.617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
570.057From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
574.497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
629.14From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
671.706From_analysisRNASeq.briggsae.WBls:0000004.control_mean
694.008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
895.269From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027221.516From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
321.811From_analysisRNASeq.briggsae.WBls:0000027.control_mean
654.699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
89.2174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
188.055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
204.786From_analysisRNASeq.briggsae.WBls:0000027.control_median
288.372From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035509.758From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038276.624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
335.768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
374.833From_analysisRNASeq.briggsae.WBls:0000038.control_mean
381.628From_analysisRNASeq.briggsae.WBls:0000038.control_median
427.488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
459.452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041221.22From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
251.88From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
259.169From_analysisRNASeq.briggsae.WBls:0000041.control_mean
265.194From_analysisRNASeq.briggsae.WBls:0000041.control_median
278.509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
285.067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
138.884From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
213.224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
231.464From_analysisRNASeq.briggsae.WBls:0000041.control_mean
236.55From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
294.365From_analysisRNASeq.briggsae.WBls:0000063.control_mean
343.438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
363.156From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
364.623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
400.607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
292.856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
294.113From_analysisRNASeq.briggsae.WBls:0000063.control_mean
353.297From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101363.156From_analysisRNASeq.briggsae.total_over_all_stages.control_median
380.984From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
347.889From_analysisRNASeq.briggsae.total_over_all_stages.control_median
386.938From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140065
00140066
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be involved in SRP-dependent cotranslational protein targeting to membrane. Predicted to be located in membrane. Is an ortholog of C. elegans trap-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16815
Corresponding_CDS_historyCBG16815:bp194
Corresponding_transcriptCBG16815.1
Other_sequence (61)
Experimental_infoExpr_patternExpr1050207
Microarray_resultsGPL8303_CB6_WBGene00036648_A
GPL8303_CB6_WBGene00036648_B
GPL14143_CBG16815_6-65_0.708_18_C
GPL14143_CBG16815_258-317_0.712_17_B
GPL14143_CBG16815_290-349_0.913_1_A
MethodGene