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WormBase Tree Display for Gene: WBGene00036945

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Name Class

WBGene00036945SMapS_parentSequencecb25.fpc4066
IdentityVersion2
NameCGC_nameCbr-elt-2From_analysisInferred_from_orthology
Sequence_nameCBG17257
Molecular_nameCBG17257a
CBG17257a.1
CBP32151
CBG17257b
CBP43170
CBG17257b.1
Other_nameCBG_17257Accession_evidenceNDBHE601483
Public_nameCbr-elt-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-elt-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classelt
RNASeq_FPKMWBls:000000210.8487From_analysisRNASeq.briggsae.WBls:0000002.control_mean
20.519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.38544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.64171From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.12531From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.01358From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.16786From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000035.03081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
6.84346From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
8.65612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.75589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
5.81427From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000425.6568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.6784From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
27.7001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
24.5052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
26.4716From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.1298From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
27.3662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.994003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.1536From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.53341From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.45263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
20.1781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.30311From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.44458From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003518.2324From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.1058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
12.491From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.665From_analysisRNASeq.briggsae.WBls:0000038.control_mean
12.8762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
22.391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.28683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000411.93269From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.56964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.1916From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.24433From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.81356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.66145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.72578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
3.21147From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.56573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.92413From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.55207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
6.69552From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
7.41863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.95443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.34532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.661From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.6238From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001017.41863From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.41259From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.2806From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.05708From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00140346
00140347
00140348
00140349
00140350
Ortholog (27)
ParalogWBGene00029417Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032529Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034302Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034303Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039143Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans elt-2. In C. elegans, elt-2 is involved in several processes, including defense response to other organism; determination of adult lifespan; and nematode larval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17257a
CBG17257b
Corresponding_CDS_historyCBG17257:bp194
Corresponding_transcriptCBG17257a.1
CBG17257b.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1053515
Microarray_resultsGPL8303_CB6_WBGene00036945_A
GPL8303_CB6_WBGene00036945_B
GPL8303_CB6_WBGene00036945_C
GPL8303_CB6_WBGene00036945_D
GPL8303_CB6_WBGene00036945_E
GPL14143_CBG17257_729-788_0.795_12_C
GPL14143_CBG17257_797-856_0.768_40_B
GPL14143_CBG17257_1074-1133_0.827_1_A
ReferenceWBPaper00046856
MethodGene