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WormBase Tree Display for Gene: WBGene00037082

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Name Class

WBGene00037082SMapS_parentSequencecb25.fpc4069b
IdentityVersion1
NameCGC_nameCbr-amdh-1From_analysisInferred_from_orthology
Sequence_nameCBG17472
Molecular_nameCBG17472
CBG17472.1
CBP48922
Other_nameCBG_17472Accession_evidenceNDBHE600955
Public_nameCBG17472
DB_infoDatabaseNDBlocus_tagCBG_17472
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
228 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-amdh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classamdh
Allele (44)
RNASeq_FPKMWBls:000000210.0119From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.7357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.72267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.57746From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.82095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.15006From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.2142From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000032.32459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.3367From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.34882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
2.55663From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.99649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.0205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
6.64795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.33422From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.81823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
7.43958From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.92835From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.71549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.093138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.773898From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.17452From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.65651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.937759From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.10162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
1.15629From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000355.82767From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.6154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.49791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.90095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.10079From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.30064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.82872From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000416.05528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.92346From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.31784From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.78992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
9.36915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.3884From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.58916From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.69572From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.51455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.11431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.51138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.59321From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.62841From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.87302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.05011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.73311From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.26237From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.43216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.90095From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.11005From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.36012From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.27418From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140482
00140483
00140484
00140485
00140486
Ortholog (44)
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides. Predicted to be involved in histidine catabolic process to glutamate and formamide. Predicted to be located in cytoplasm. Is an ortholog of C. elegans amdh-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17472
Corresponding_CDS_historyCBG17472:bp265
Corresponding_transcriptCBG17472.1
Other_sequence (57)
Experimental_infoExpr_patternExpr1061973
Microarray_resultsGPL8303_CB6_WBGene00037082_A
GPL8303_CB6_WBGene00037082_B
GPL14143_CBG17472_189-248_0.716_116_B
GPL14143_CBG17472_514-573_0.902_9_A
GPL14143_CBG17472_801-860_0.897_11_C
MethodGene