Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00037292

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00037292SMapS_parentSequencecb25.fpc4069d
IdentityVersion3
NameCGC_nameCbr-elpc-4From_analysisInferred_from_orthology
Sequence_nameCBG17740
Molecular_nameCBG17740
CBG17740.1
CBP10643
Other_nameCBG_17740Accession_evidenceNDBHE600976
Public_nameCbr-elpc-4
DB_infoDatabaseNDBlocus_tagCBG_17740
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
208 Oct 2007 16:51:06WBPerson2970Name_changeCGC_nameCbr-elpc-2
320 Dec 2007 11:41:22WBPerson2970Name_changeCGC_nameCbr-elpc-2 corrected to Cbr-elpc-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classelpc
RNASeq_FPKMWBls:00000021.99501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.72592From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.06001From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.12273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.72978From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.74136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.90068From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000032.9369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
4.58444From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.23198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
5.05837From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.00623From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000046.2518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
7.00684From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.76189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.00854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.78196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.68719From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.63177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.382014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.68948From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.32322From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.89815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.68161From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.41085From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.67375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.0178From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.68443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.49268From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.79904From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.10539From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.63266From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.24814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000415.10638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.28209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.62138From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.69262From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.96066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.42136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
11.5753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.50546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.64187From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.73306From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006314.9555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.14999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.33045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
8.57002From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.11499From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.56898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.35479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.46241From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.65495From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001015.43831From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.89815From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.68395From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.95219From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00140748
00140749
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be involved in tRNA wobble uridine modification. Predicted to be part of elongator holoenzyme complex. Is an ortholog of C. elegans elpc-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17740
Corresponding_CDS_historyCBG17740:bp194
Corresponding_transcriptCBG17740.1
Other_sequenceHBC23803_1
CRC00267_1
CR03251
CJC05793_1
EX910475.1
Experimental_infoExpr_patternExpr1062381
Microarray_resultsGPL8303_CB6_WBGene00037292_A
GPL14143_CBG17740_6-65_0.875_20_C
GPL14143_CBG17740_35-94_0.774_56_A
GPL14143_CBG17740_908-967_0.909_9_B
MethodGene