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WormBase Tree Display for Gene: WBGene00037478

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Name Class

WBGene00037478SMapS_parentSequencecb25.fpc4079a
IdentityVersion2
NameCGC_nameCbr-arl-6From_analysisInferred_from_orthology
Sequence_nameCBG17978
Molecular_nameCBG17978
CBG17978.1
CBP04315
Other_nameCBG_17978Accession_evidenceNDBHE600963
Public_nameCbr-arl-6
DB_infoDatabaseNDBlocus_tagCBG_17978
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-arl-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classarl
RNASeq_FPKMWBls:00000021.69592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.20799From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.24092From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.68714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.37395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.96842From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.99948From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.6416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.17837From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.71514From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.08702From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.14792From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.74032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.51279From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.28526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.29836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
4.61604From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.40748From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.09741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.48111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.851009From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.27715From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.49934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.67517From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.77608From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.27286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.49528From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.366129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.09475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.20129From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.27657From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.30782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.33759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.115883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.332601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.426385From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.520169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.897778From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.62246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.5186From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.90297From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.51704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.30969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.431119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.579758From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.691228From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.847578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.928866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.263295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.527014From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.561173From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001011.49528From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.18554From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.89147From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.47938From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140892
00140893
Ortholog (29)
Paralog (15)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans arl-6. In C. elegans, arl-6 is involved in intracellular transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17978
Corresponding_CDS_historyCBG17978:bp194
Corresponding_transcriptCBG17978.1
Other_sequenceAcan_isotig07375
Experimental_infoExpr_patternExpr1055585
Microarray_resultsGPL8303_CB6_WBGene00037478_A
GPL8303_CB6_WBGene00037478_B
GPL14143_CBG17978_25-84_0.923_5_C
GPL14143_CBG17978_229-288_0.927_4_B
GPL14143_CBG17978_503-562_0.960_1_A
MethodGene