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WormBase Tree Display for Gene: WBGene00037571

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Name Class

WBGene00037571SMapS_parentSequencecb25.fpc4079a
IdentityVersion2
NameCGC_nameCbr-ckb-2.2From_analysisInferred_from_orthology
Sequence_nameCBG18080
Molecular_nameCBG18080
CBG18080.1
CBP41656
Other_nameCBG_18080Accession_evidenceNDBHE600963
Public_nameCbr-ckb-2.2
DB_infoDatabaseNDBlocus_tagCBG_18080
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameCbr-ckb-2.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classckb
AlleleWBVar00056445
WBVar00056440
RNASeq_FPKMWBls:00000021.56139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.26477From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.35374From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.23506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.12928From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.99379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.26375From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.526686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.643494From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.760302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.484626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.590538From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.728598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.30708From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.88557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.75582From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.7707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.99282From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
2.40139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.139256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.413688From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.90823From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.17176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.06019From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.70669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
1.85785From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.63548From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.91022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.22727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.96399From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.93005From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.70072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000413.34812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.35662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.49232From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.55825From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.62801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.90024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.72882From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.78569From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.82963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
4.65152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.1264From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.5454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.69415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.81294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.15153From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.08474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.98223From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.78613From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001013.35662From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.06676From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.28769From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.46979From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (43)
Paralog (13)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Protein kinase-like domain superfamily and Choline/ethanolamine kinase. Is an ortholog of C. elegans ckb-2. In C. elegans, ckb-2 is involved in CDP-choline pathway and IRE1-mediated unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18080
Corresponding_CDS_historyCBG18080:bp194
CBG18080:bp255
Corresponding_transcriptCBG18080.1
Other_sequenceOOC01906_1
CJC13898_1
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00037572_B
MethodGene