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WormBase Tree Display for Gene: WBGene00037696

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Name Class

WBGene00037696SMapS_parentSequencecb25.fpc4079b
IdentityVersion2
NameCGC_nameCbr-set-16From_analysisInferred_from_orthology
Sequence_nameCBG18244
Molecular_nameCBG18244
CBG18244.1
CBP43972
Other_nameCBG_18244Accession_evidenceNDBHE600936
Public_nameCbr-set-16
DB_infoDatabaseNDBlocus_tagCBG_18244
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-set-16
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:000000210.0673From_analysisRNASeq.briggsae.WBls:0000002.control_mean
11.6581From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.9995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.54415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.3288From_analysisRNASeq.briggsae.WBls:0000002.control_median
12.5907From_analysisRNASeq.briggsae.WBls:0000002.control_mean
20.161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000338.7546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
38.9698From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
39.185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
35.2791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
37.7396From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000440.5254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
40.8968From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
41.2682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
40.7437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
42.1152From_analysisRNASeq.briggsae.WBls:0000004.control_mean
42.4326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
45.6061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002715.3619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.65994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
6.95322From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.32502From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.4195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.68636From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.84864From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003510.0986From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000382.46417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.63455From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.26426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.40514From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.54601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.26378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004126.9154From_analysisRNASeq.briggsae.WBls:0000041.control_mean
31.7722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
32.5004From_analysisRNASeq.briggsae.WBls:0000041.control_median
33.2286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
35.0252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.63557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
20.598From_analysisRNASeq.briggsae.WBls:0000041.control_mean
20.7866From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.12517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.80109From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006314.7613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.1343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
15.2679From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
15.6068From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.0399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
16.8307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
14.4273From_analysisRNASeq.briggsae.WBls:0000063.control_mean
15.2011From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.52968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010113.5379From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.6235From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
13.8451From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.4521From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141193
Ortholog (41)
Paralog (35)
Structured_descriptionAutomated_descriptionPredicted to be located in nucleus. Is an ortholog of C. elegans set-16. In C. elegans, set-16 is involved in programmed cell death and regulation of vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18244
Corresponding_CDS_historyCBG18244:bp255
Corresponding_transcriptCBG18244.1
Other_sequence (24)
Experimental_infoExpr_patternExpr1052369
Microarray_resultsGPL8303_CB6_WBGene00037696_A
GPL8303_CB6_WBGene00037696_C
GPL8303_CB6_WBGene00037696_D
GPL8303_CB6_WBGene00037696_E
GPL14143_CBG18244_6744-6803_0.891_45_C
GPL14143_CBG18244_7284-7343_0.939_11_B
GPL14143_CBG18244_7456-7515_0.954_3_A
MethodGene