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WormBase Tree Display for Gene: WBGene00037766

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Name Class

WBGene00037766SMapS_parentSequencecb25.fpc4079b
IdentityVersion2
NameCGC_nameCbr-tat-3From_analysisInferred_from_orthology
Sequence_nameCBG18322
Molecular_nameCBG18322
CBG18322.1
CBP45303
Other_nameCBG_18322Accession_evidenceNDBHE600936
Public_nameCbr-tat-3
DB_infoDatabaseNDBlocus_tagCBG_18322
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tat-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtat
RNASeq_FPKMWBls:000000219.1732From_analysisRNASeq.briggsae.WBls:0000002.control_mean
22.9288From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
25.0994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.49135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
20.6239From_analysisRNASeq.briggsae.WBls:0000002.control_mean
23.9524From_analysisRNASeq.briggsae.WBls:0000002.control_median
24.9759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000310.1041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
15.7481From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
21.3922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
12.9502From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
14.8155From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000047.93937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.07285From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
8.20634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
8.49002From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.54273From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.62016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.45777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.12459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.82067From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.77776From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.38802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
16.0752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.60434From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.60212From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003510.1271From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.4534From_analysisRNASeq.briggsae.WBls:0000038.control_mean
12.8151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
12.8531From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
17.7875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.31986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004145.5707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
45.618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
46.4324From_analysisRNASeq.briggsae.WBls:0000041.control_median
47.2467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
47.8233From_analysisRNASeq.briggsae.WBls:0000041.control_mean
52.858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
30.6904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
45.6795From_analysisRNASeq.briggsae.WBls:0000041.control_mean
52.0932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006325.8218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.0056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
28.4388From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
29.3721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
30.22From_analysisRNASeq.briggsae.WBls:0000063.control_mean
41.4616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
23.1464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
27.2222From_analysisRNASeq.briggsae.WBls:0000063.control_median
29.041From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010112.891From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.2761From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.96From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.6186From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141280
00141281
00141282
00141283
00141284
00141285
00141286
00141287
Ortholog (40)
ParalogWBGene00025623Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00032754Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032829Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036728Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP hydrolysis activity; ATPase-coupled intramembrane lipid transporter activity; and ion binding activity. Predicted to be involved in phospholipid transport. Predicted to be located in membrane. Is an ortholog of C. elegans tat-3. In C. elegans, tat-3 is involved in sterol metabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18322
Corresponding_CDS_historyCBG18322:bp194
CBG18322:bp255
Corresponding_transcriptCBG18322.1
Other_sequence (28)
Experimental_infoExpr_patternExpr1062555
Microarray_resultsGPL8303_CB6_WBGene00037766_A
GPL14143_CBG18322_2827-2886_0.854_46_C
GPL14143_CBG18322_3209-3268_0.875_32_A
GPL14143_CBG18322_3324-3383_0.749_286_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene