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WormBase Tree Display for Gene: WBGene00037888

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Name Class

WBGene00037888SMapS_parentSequencecb25.fpc4090
IdentityVersion1
NameSequence_nameCBG18472
Molecular_nameCBG18472
CBG18472.1
CBP35650
Other_nameCBG_18472Accession_evidenceNDBHE601532
Public_nameCBG18472
DB_infoDatabaseNDBlocus_tagCBG_18472
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
Allele (11)
RNASeq_FPKMWBls:000000210.5159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
18.8697From_analysisRNASeq.briggsae.WBls:0000002.control_mean
22.5832From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
23.51From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
17.677From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.3411From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000325.9472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
31.9855From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
38.0239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
31.8954From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
31.9555From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000419.3355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
20.4974From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
21.6594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
18.9785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
19.1701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
19.6972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
19.7681From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002711.4772From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.06314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
27.2892From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.07914From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.7155From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.4305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.75482From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003515.3753From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.3795From_analysisRNASeq.briggsae.WBls:0000038.control_mean
18.1627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
18.3473From_analysisRNASeq.briggsae.WBls:0000038.control_median
18.5319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
19.067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
9.75649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004130.6996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
31.0992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
31.3125From_analysisRNASeq.briggsae.WBls:0000041.control_median
31.5258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
31.6335From_analysisRNASeq.briggsae.WBls:0000041.control_mean
33.2095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
24.2807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
30.5029From_analysisRNASeq.briggsae.WBls:0000041.control_mean
32.2027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006314.3515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
14.7916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.0512From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
18.0448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
18.1478From_analysisRNASeq.briggsae.WBls:0000063.control_mean
28.4999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.548From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.5588From_analysisRNASeq.briggsae.WBls:0000063.control_mean
20.6141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010118.5319From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.3015From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
19.0353From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.8187From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (27)
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans pdtf-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18472
Corresponding_CDS_historyCBG18472:bp194
Corresponding_transcriptCBG18472.1
Other_sequenceSS01521
CJC02378_1
MP00899
Tcol_isotig23711
DA03346
Experimental_infoExpr_patternExpr1066276
Microarray_resultsGPL8303_CB6_WBGene00037888_A
GPL8303_CB6_WBGene00037888_B
GPL14143_CBG18472_1190-1249_0.410_369_B
GPL14143_CBG18472_1374-1433_0.905_2_A
GPL14143_CBG18472_1378-1437_0.879_15_C
MethodGene