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WormBase Tree Display for Gene: WBGene00038225

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Name Class

WBGene00038225SMapS_parentSequencecb25.fpc4126
IdentityVersion1
NameSequence_nameCBG18926
Molecular_nameCBG18926
CBG18926.1
CBP38938
Other_nameCBG_18926Accession_evidenceNDBHE601047
Public_nameCBG18926
DB_infoDatabaseNDBlocus_tagCBG_18926
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000212.4065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
32.4461From_analysisRNASeq.briggsae.WBls:0000002.control_mean
36.2327From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
48.6992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.7288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
24.4807From_analysisRNASeq.briggsae.WBls:0000002.control_median
27.5168From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.585905From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.17181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.780293From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.16907From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.634From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
12.5128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
8.75513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
12.1436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
7.03562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.81982From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.85339From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002723.2455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
28.2163From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
29.5283From_analysisRNASeq.briggsae.WBls:0000027.control_mean
37.1232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
101.432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
32.6698From_analysisRNASeq.briggsae.WBls:0000027.control_median
47.5042From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003579.8581From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038102.42From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
47.9591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
74.2452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
76.9343From_analysisRNASeq.briggsae.WBls:0000038.control_mean
78.6791From_analysisRNASeq.briggsae.WBls:0000038.control_median
83.113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.0894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
15.181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.9799From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.7788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
19.643From_analysisRNASeq.briggsae.WBls:0000041.control_mean
34.523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
16.599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
17.6889From_analysisRNASeq.briggsae.WBls:0000041.control_median
20.654From_analysisRNASeq.briggsae.WBls:0000041.control_mean
28.7527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063119.144From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
119.746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
144.894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
86.2572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
94.0082From_analysisRNASeq.briggsae.WBls:0000063.control_mean
102.701From_analysisRNASeq.briggsae.WBls:0000063.control_median
33.9807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
84.0036From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010136.2327From_analysisRNASeq.briggsae.total_over_all_stages.control_median
46.5475From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
28.4845From_analysisRNASeq.briggsae.total_over_all_stages.control_median
41.3826From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (25)
ParalogWBGene00029301Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035131Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: HotDog domain superfamily. Is an ortholog of C. elegans F57F4.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18926
Corresponding_CDS_historyCBG18926:bp194
CBG18926:bp255
Corresponding_transcriptCBG18926.1
Other_sequenceFK801835.1
JI482788.1
JI464455.1
CBC02790_1
BXC04078_1
Experimental_infoExpr_patternExpr1052611
Microarray_resultsGPL8303_CB6_WBGene00038225_A
GPL8303_CB6_WBGene00038225_B
GPL14143_CBG18926_1160-1219_0.946_3_C
GPL14143_CBG18926_1187-1246_0.959_2_B
GPL14143_CBG18926_1327-1386_0.967_1_A
MethodGene