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WormBase Tree Display for Gene: WBGene00038287

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Name Class

WBGene00038287SMapS_parentSequencecb25.fpc4126
IdentityVersion1
NameSequence_nameCBG18997
Molecular_nameCBG18997
CBG18997.1
CBP46843
Other_nameCBG_18997Accession_evidenceNDBHE601047
Public_nameCBG18997
DB_infoDatabaseNDBlocus_tagCBG_18997
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000211.9553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.7803From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
13.6499From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
11.4044From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.3678From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.66814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.453446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.4757From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.49795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
3.00164From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.05352From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000417.1654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
18.7451From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
20.3249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
22.0788From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
22.2712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
22.3869From_analysisRNASeq.briggsae.WBls:0000004.control_mean
30.0943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.78855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
22.5273From_analysisRNASeq.briggsae.WBls:0000027.control_mean
59.4342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.35929From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.3254From_analysisRNASeq.briggsae.WBls:0000027.control_median
24.9684From_analysisRNASeq.briggsae.WBls:0000027.control_mean
32.2916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000359.40009From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.9681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
19.816From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.34465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
23.6639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
24.2782From_analysisRNASeq.briggsae.WBls:0000038.control_mean
55.1363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004114.4936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.84833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.9882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.23847From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.48874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.20472From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.60759From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.72645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.21809From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.76325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.1289From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.59744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.18526From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.81264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.04914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.66126From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.49895From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.32311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010113.2627From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.40009From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.7602From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.08167From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00141743
00141744
00141745
Ortholog (27)
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides. Predicted to be involved in ceramide metabolic process. Predicted to be located in membrane. Is an ortholog of C. elegans W02F12.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18997
Corresponding_CDS_historyCBG18997:bp194
CBG18997:bp255
Corresponding_transcriptCBG18997.1
Other_sequenceFC553606.1
JI224503.1
Name_isotig03428
ACC24050_1
HBC08788_1
PPC20486_1
ES412055.1
BU666627.1
FC546188.1
NAC01131_1
Experimental_infoExpr_patternExpr1068276
Microarray_resultsGPL8303_CB6_WBGene00038287_A
GPL8303_CB6_WBGene00038287_B
GPL14143_CBG18997_442-501_0.929_6_B
GPL14143_CBG18997_527-586_0.615_94_C
GPL14143_CBG18997_725-784_0.957_1_A
MethodGene