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WormBase Tree Display for Gene: WBGene00038297

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Name Class

WBGene00038297SMapS_parentSequencecb25.fpc4126
IdentityVersion1
NameSequence_nameCBG19009
Molecular_nameCBG19009
CBG19009.1
CBP04528
Other_nameCBG_19009Accession_evidenceNDBHE601047
Public_nameCBG19009
DB_infoDatabaseNDBlocus_tagCBG_19009
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00138923
WBVar00138924
WBVar00138925
WBVar00138926
RNASeq_FPKMWBls:000000211.1774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
11.5648From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
13.7552From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.5235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.3711From_analysisRNASeq.briggsae.WBls:0000002.control_median
11.6202From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.21496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.093265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.17765From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.26204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.85541From_analysisRNASeq.briggsae.WBls:0000003.control_mean
3.21094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.7431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
8.67929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.71119From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.0361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
10.092From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
10.1678From_analysisRNASeq.briggsae.WBls:0000004.control_mean
11.2885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.0852From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.2858From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.23917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
37.5329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
24.309From_analysisRNASeq.briggsae.WBls:0000027.control_median
28.651From_analysisRNASeq.briggsae.WBls:0000027.control_mean
62.7467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.51451From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.7533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
16.9623From_analysisRNASeq.briggsae.WBls:0000038.control_median
19.4226From_analysisRNASeq.briggsae.WBls:0000038.control_mean
20.1713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.95526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
40.8106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004115.7868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.86657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.96842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.55729From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.14617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.19199From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.2517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.61252From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.07888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.51642From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.20636From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.24676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.48783From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.03644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
9.26077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
6.34891From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.77474From_analysisRNASeq.briggsae.WBls:0000063.control_median
7.06166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.4214From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.03644From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.2685From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.06089From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (28)
ParalogWBGene00028478Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035967Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087673Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00088130Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: EGF-like domain. Is an ortholog of C. elegans T25F10.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19009
Corresponding_CDS_historyCBG19009:bp194
CBG19009:bp255
Corresponding_transcriptCBG19009.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1053138
Microarray_resultsGPL8303_CB6_WBGene00038297_A
GPL8303_CB6_WBGene00038297_B
GPL14143_CBG19009_467-526_0.851_37_B
GPL14143_CBG19009_645-704_0.883_19_C
GPL14143_CBG19009_843-902_0.930_2_A
MethodGene