WormBase Tree Display for Gene: WBGene00038312

WBGene00038312 SMap: S_parent: Sequence: cb25.fpc4126
  Identity: Version: 2
    Name: CGC_name: Cbr-col-142 From_analysis: Inferred_from_orthology
      Sequence_name: CBG19027
      Molecular_name: CBG19027
        CBG19027.1
        CBP11039
      Other_name: CBG_19027 Accession_evidence: NDB HE601047
      Public_name: Cbr-col-142
    DB_info: Database: NDB locus_tag CBG_19027
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:08 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 15 Oct 2007 15:19:45 WBPerson2970 Name_change: CGC_name: Cbr-col-142
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000002 150.488 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        59.4315 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        70.2985 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        93.406 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        48.9398 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        64.865 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        82.2895 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 119.091 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        119.713 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        3.43766 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        80.7472 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        57.8685 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        75.0275 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        88.4798 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
      WBls:0000035 24.9797 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 161.735 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        213.669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        252.895 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        292.121 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        349.258 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        729.506 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 125.838 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        187.767 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        194.518 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        197.393 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        207.019 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        257.446 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        150.06 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        156.803 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        31.0083 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        91.2801 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        257.028 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        308.648 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        310.325 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        331.246 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        334.921 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        268.918 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        319.347 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        328.369 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 119.091 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        139.127 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        120.846 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        58.65 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00141771
    Ortholog (27)
    Paralog (155)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-142. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG19027
    Corresponding_CDS_history: CBG19027:bp194
      CBG19027:bp255
    Corresponding_transcript: CBG19027.1
    Other_sequence (27)
  Experimental_info: Expr_pattern: Expr1059802
    Microarray_results: GPL8303_CB6_WBGene00038312_A
      GPL14143_CBG19027_196-255_0.871_15_A
  Method: Gene