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WormBase Tree Display for Gene: WBGene00038504

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Name Class

WBGene00038504SMapS_parentSequencecb25.fpc4126
IdentityVersion1
NameSequence_nameCBG19248
Molecular_nameCBG19248
CBG19248.1
CBP42780
Other_nameCBG_19248Accession_evidenceNDBHE601047
Public_nameCBG19248
DB_infoDatabaseNDBlocus_tagCBG_19248
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000023.70976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.53635From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.72815From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.93835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.41002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.12305From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.39862From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.066464From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.132927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.134386From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.27023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.1701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0.287724From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.405349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.097509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.128105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.215621From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.27704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.173882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.72274From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.79671From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.49351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.60812From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.80495From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.82967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.82296From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.0225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
14.4019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.45852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.17068From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.44144From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.88284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000412.36393From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.06343From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.13885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.15391From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.16897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.58197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.4304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.03167From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.50588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.38569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.45819From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.78991From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.46434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.65101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.69977From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.12712From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.90768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.38569From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.52834From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.34356From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.3468From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141991
Ortholog (24)
ParalogWBGene00026254Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032502Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032584Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033479Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035580Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036308Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036420Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037046Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039017Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lipid binding activity. Is an ortholog of C. elegans F44A2.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19248
Corresponding_CDS_historyCBG19248:bp194
CBG19248:bp255
Corresponding_transcriptCBG19248.1
Other_sequenceDviv_isotig32900
Oden_isotig25382
Acan_isotig10106
Oden_isotig28336
Oden_isotig19347
Experimental_infoExpr_patternExpr1052428
Microarray_resultsGPL8303_CB6_WBGene00038504_A
GPL8303_CB6_WBGene00038504_B
GPL14143_CBG19248_724-783_0.893_20_B
GPL14143_CBG19248_907-966_0.649_168_C
GPL14143_CBG19248_1465-1524_0.928_5_A
MethodGene