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WormBase Tree Display for Gene: WBGene00038517

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Name Class

WBGene00038517SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-gpa-3From_analysisInferred_from_orthology
Sequence_nameCBG19263
Molecular_nameCBG19263
CBG19263.1
CBP44703
Other_nameCBG_19263Accession_evidenceNDBHE601047
Public_nameCbr-gpa-3
DB_infoDatabaseNDBlocus_tagCBG_19263
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-gpa-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgpa
RNASeq_FPKMWBls:00000022.54468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.89897From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.01676From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.13547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.9476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.66113From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.78072From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.118744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.136122From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.153501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.286789From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.588123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.447191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.692933From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.938675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.607594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.655508From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.672495From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.713508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.909009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.07724From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.0285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.67158From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.4956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.55287From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.37759From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000355.04744From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.496472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.57192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.23583From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.51315From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.89973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.08448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.567743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.663874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.784996From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.906118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.32122From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.14716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.79062From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.89303From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.67513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.39818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.397287From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.42149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.471269From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.516938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.57674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.494103From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.505594From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.04713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.938675From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.0974From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.992903From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.07771From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142015
00142016
00142017
00142018
00142019
00142020
00142021
Ortholog (30)
Paralog (21)
Structured_descriptionAutomated_descriptionPredicted to enable G-protein beta/gamma-subunit complex binding activity; GTP binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Is an ortholog of C. elegans gpa-3. In C. elegans, gpa-3 is involved in several processes, including cellular response to cGMP; regulation of gene expression; and signal transduction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19263
Corresponding_CDS_historyCBG19263:bp194
CBG19263:bp255
Corresponding_transcriptCBG19263.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1060672
Microarray_resultsGPL8303_CB6_WBGene00038517_A
GPL8303_CB6_WBGene00038517_B
GPL14143_CBG19263_488-547_0.916_12_C
GPL14143_CBG19263_931-990_0.964_1_B
GPL14143_CBG19263_1009-1068_0.837_54_A
MethodGene