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WormBase Tree Display for Gene: WBGene00038518

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Name Class

WBGene00038518SMapS_parentSequencecb25.fpc4126
IdentityVersion1
NameSequence_nameCBG19264
Molecular_nameCBG19264
CBG19264.1
CBP19566
Other_nameCBG_19264Accession_evidenceNDBHE601047
Public_nameCBG19264
DB_infoDatabaseNDBlocus_tagCBG_19264
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00127327
WBVar00127328
WBVar00127329
WBVar00025874
WBVar00127330
WBVar00127326
WBVar00025879
RNASeq_FPKMWBls:000000223.1665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.57068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.50975From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
9.74898From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.00382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.25678From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.06269From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.666901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.753328From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.839755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.455921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.509268From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.583765From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.480701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.912845From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.1199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.50448From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.49367From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.07449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.39698From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.20295From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.1632From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.44668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.61962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.20035From_analysisRNASeq.briggsae.WBls:0000038.control_median
40.8053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.78108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.936456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.50067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.1375From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.36248From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.77432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.23846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.28116From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.50639From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.66768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.56937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.03373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.19025From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.34072From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.21611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.36069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.25093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.5337From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.68722From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001012.57068From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.42873From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.16271From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.63261From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (53)
Paralog (19)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Uncharacterised oxidoreductase Dhs-27; Uncharacterized oxidoreductase dhs-27; CHK kinase-like; and Protein kinase-like domain superfamily. Is an ortholog of C. elegans E02C12.6 and E02C12.8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19264
Corresponding_CDS_historyCBG19264:bp194
Corresponding_transcriptCBG19264.1
Other_sequenceCR11701
Experimental_infoExpr_patternExpr1069371
Microarray_resultsGPL8303_CB6_WBGene00038518_A
GPL14143_CBG19264_272-331_0.477_220_A
Expression_clusterWBPaper00051137:Santeuil-virus_downregulated_JU1264
WBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene