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WormBase Tree Display for Gene: WBGene00038598

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Name Class

WBGene00038598SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-aqp-4From_analysisInferred_from_orthology
Sequence_nameCBG19362
Molecular_nameCBG19362
CBG19362.1
CBP28552
Other_nameCBG_19362Accession_evidenceNDBHE601047
Public_nameCbr-aqp-4
DB_infoDatabaseNDBlocus_tagCBG_19362
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-aqp-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaqp
RNASeq_FPKMWBls:000000213.2009From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.5502From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
16.3499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.70271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.1967From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.4501From_analysisRNASeq.briggsae.WBls:0000002.control_median
21.1841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.53545From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.07091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.619224From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.23004From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000416.033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
16.7388From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
17.4446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
15.4757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
16.9979From_analysisRNASeq.briggsae.WBls:0000004.control_mean
17.5352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
18.501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000272.46817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
6.09741From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.63492From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.18913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
11.289From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.8638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.91202From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003517.9819From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.6344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
13.9265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
14.9787From_analysisRNASeq.briggsae.WBls:0000038.control_median
16.0309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
19.3383From_analysisRNASeq.briggsae.WBls:0000038.control_mean
35.7613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.5497From_analysisRNASeq.briggsae.WBls:0000041.control_mean
20.9894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.99162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.38828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.60884From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.8294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.8451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.38013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.40399From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
35.308From_analysisRNASeq.briggsae.WBls:0000063.control_mean
39.7317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
40.8556From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
42.5446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
53.4082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
30.9975From_analysisRNASeq.briggsae.WBls:0000063.control_mean
40.2937From_analysisRNASeq.briggsae.WBls:0000063.control_median
9.44479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010114.5502From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.3174From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.0129From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.2382From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142103
00142104
00142105
Ortholog (28)
ParalogWBGene00024232Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028320Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031159Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031219Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033933Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034718Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034989Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable channel activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans aqp-4. In C. elegans, aqp-4 is involved in water transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19362
Corresponding_CDS_historyCBG19362:bp194
Corresponding_transcriptCBG19362.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1055133
Microarray_resultsGPL8303_CB6_WBGene00038598_A
GPL8303_CB6_WBGene00038598_B
GPL14143_CBG19362_389-448_0.902_6_C
GPL14143_CBG19362_461-520_0.844_14_B
GPL14143_CBG19362_719-778_0.742_52_A
MethodGene