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WormBase Tree Display for Gene: WBGene00038633

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Name Class

WBGene00038633SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-mec-9From_analysisInferred_from_orthology
Sequence_nameCBG19401
Molecular_nameCBG19401
CBG19401.1
CBP47221
Other_nameCBG_19401Accession_evidenceNDBHE601047
Public_nameCbr-mec-9
DB_infoDatabaseNDBlocus_tagCBG_19401
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mec-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmec
Allele (12)
RNASeq_FPKMWBls:00000022.49595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.7489From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.81065From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.18711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.00141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.60834From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.62243From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.053262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.126217From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.199173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.084145From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.152216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.203849From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.255482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.347781From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.349655From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.438008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.554789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.390551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.671133From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.51534From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.48432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.57773From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.9261From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.15838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.94368From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.366355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.0049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.43249From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.86008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.10617From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.19334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.352421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.445608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.466416From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.487224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.12893From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.23046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.15675From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.43925From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.82628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.29352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.621455From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.698796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.708084From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.844915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.855479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.648188From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.744969From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.781854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.844915From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.51857From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.813384From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.3537From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142136
00142137
Ortholog (21)
Paralog (29)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity and serine-type endopeptidase inhibitor activity. Is an ortholog of C. elegans mec-9. In C. elegans, mec-9 is involved in positive regulation of multicellular organismal process and response to mechanical stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19401
Corresponding_CDS_historyCBG19401:bp194
CBG19401:bp255
Corresponding_transcriptCBG19401.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1052231
Microarray_resultsGPL8303_CB6_WBGene00038633_A
GPL8303_CB6_WBGene00038633_B
GPL14143_CBG19401_1656-1715_0.705_234_C
GPL14143_CBG19401_2242-2301_0.901_15_A
GPL14143_CBG19401_2375-2434_0.930_2_B
MethodGene