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WormBase Tree Display for Gene: WBGene00038777

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Name Class

WBGene00038777SMapS_parentSequencecb25.fpc4131
IdentityVersion2
NameCGC_nameCbr-fut-4From_analysisInferred_from_orthology
Sequence_nameCBG19588
Molecular_nameCBG19588a
CBG19588a.1
CBP42632
CBG19588b
CBP40084
CBG19588b.1
Other_nameCBG_19588Accession_evidenceNDBHE601321
Public_nameCbr-fut-4
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-fut-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfut
RNASeq_FPKMWBls:00000020.072042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.200492From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.318871From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.684078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.383754From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.389448From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.578404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.083775From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.167551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.069147From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.178186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.158389From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.475168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.143604From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.190594From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.287207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.160536From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.157961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.3052From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.325973From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.493985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.568855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.173443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.378434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.458781From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.48132From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.584206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.69904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.261598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.471257From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.730823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.375092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.524662From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.555497From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.561401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.13132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.558449From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.604772From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.00532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.296226From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.355722From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.274402From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.351513From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142246
00142247
00142248
Ortholog (29)
ParalogWBGene00034199Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00025514Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026070Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034069Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034200Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039569Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable fucosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Is an ortholog of C. elegans fut-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19588a
CBG19588b
Corresponding_CDS_historyCBG19588:bp194
CBG19588:bp255
Corresponding_transcriptCBG19588a.1
CBG19588b.1
Other_sequenceOden_isotig15541
JI170527.1
JO472372.1
Experimental_infoExpr_patternExpr1054143
Microarray_resultsGPL8303_CB6_WBGene00038777_A
GPL14143_CBG19588_575-634_0.920_9_A
MethodGene