Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00038853

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00038853SMapS_parentSequencecb25.fpc4132b
IdentityVersion2
NameCGC_nameCbr-set-1From_analysisInferred_from_orthology
Sequence_nameCBG19678
Molecular_nameCBG19678
CBG19678.1
CBP11273
Other_nameCBG_19678Accession_evidenceNDBHE600934
Public_nameCbr-set-1
DB_infoDatabaseNDBlocus_tagCBG_19678
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-set-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:000000241.2686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
47.0111From_analysisRNASeq.briggsae.WBls:0000002.control_mean
48.7062From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
51.0584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
49.8823From_analysisRNASeq.briggsae.WBls:0000002.control_median
53.6073From_analysisRNASeq.briggsae.WBls:0000002.control_mean
73.3959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003323.058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
385.731From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
448.404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
266.19From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
345.884From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004395.731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
398.988From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
402.245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
394.608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
437.124From_analysisRNASeq.briggsae.WBls:0000004.control_mean
472.743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
520.291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002710.177From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.20641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
19.769From_analysisRNASeq.briggsae.WBls:0000027.control_mean
47.9237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
15.201From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.883From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003519.5024From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.7508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
16.8323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
18.0624From_analysisRNASeq.briggsae.WBls:0000038.control_median
19.2925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
19.5796From_analysisRNASeq.briggsae.WBls:0000038.control_mean
30.4428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004123.9248From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
76.2991From_analysisRNASeq.briggsae.WBls:0000041.control_mean
87.5263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
90.6632From_analysisRNASeq.briggsae.WBls:0000041.control_median
93.8001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
99.9454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
44.1999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
44.2926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
65.6149From_analysisRNASeq.briggsae.WBls:0000041.control_mean
65.9094From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006330.1884From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
30.4375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
33.558From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
38.6696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
41.2648From_analysisRNASeq.briggsae.WBls:0000063.control_mean
73.4706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
36.1138From_analysisRNASeq.briggsae.WBls:0000063.control_median
43.1884From_analysisRNASeq.briggsae.WBls:0000063.control_mean
52.8062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010133.558From_analysisRNASeq.briggsae.total_over_all_stages.control_median
87.124From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
116.193From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
44.2463From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00142328
Ortholog (28)
Paralog (35)
Structured_descriptionAutomated_descriptionPredicted to enable histone H4K20 methyltransferase activity. Is an ortholog of C. elegans set-1. In C. elegans, set-1 is involved in embryo development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19678
Corresponding_CDS_historyCBG19678:bp194
Corresponding_transcriptCBG19678.1
Other_sequence (28)
Experimental_infoExpr_patternExpr1069385
Microarray_resultsGPL8303_CB6_WBGene00038853_A
GPL8303_CB6_WBGene00038853_B
GPL14143_CBG19678_256-315_0.918_8_B
GPL14143_CBG19678_460-519_0.943_1_A
GPL14143_CBG19678_597-656_0.844_55_C
MethodGene