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WormBase Tree Display for Gene: WBGene00038984

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Name Class

WBGene00038984SMapS_parentSequencecb25.fpc4152
IdentityVersion2
NameCGC_nameCbr-glf-1From_analysisInferred_from_orthology
Sequence_nameCBG19828
Molecular_nameCBG19828
CBG19828.1
CBP11397
Other_nameCBG_19828Accession_evidenceNDBHE601481
Public_nameCbr-glf-1
DB_infoDatabaseNDBlocus_tagCBG_19828
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-glf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classglf
AlleleWBVar00039384
WBVar00039389
RNASeq_FPKMWBls:0000002105.602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
132.349From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
142.474From_analysisRNASeq.briggsae.WBls:0000002.control_mean
189.47From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
116.346From_analysisRNASeq.briggsae.WBls:0000002.control_mean
118.976From_analysisRNASeq.briggsae.WBls:0000002.control_median
37.9614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.186656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
18.892From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
37.5973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
23.781From_analysisRNASeq.briggsae.WBls:0000003.control_mean
33.5592From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004311.203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
317.128From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
323.053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
264.49From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
298.534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
308.558From_analysisRNASeq.briggsae.WBls:0000004.control_mean
345.512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:00000241.01824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
1.18828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
1.84822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
2.19239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
2.39934From_analysisRNASeq.briggsae.WBls:0000024.control_median
2.60571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
2.95046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
361.436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
91.8132From_analysisRNASeq.briggsae.WBls:0000024.control_mean
0.711188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
1.9228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
6.48169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:0000027243.465From_analysisRNASeq.briggsae.WBls:0000027.control_mean
40.2864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
593.022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
97.0856From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
102.839From_analysisRNASeq.briggsae.WBls:0000027.control_median
108.593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
209.747From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035311.801From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038123.616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
158.626From_analysisRNASeq.briggsae.WBls:0000038.control_mean
171.727From_analysisRNASeq.briggsae.WBls:0000038.control_median
219.838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
251.863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
39.1886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.639905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
14.9428From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.33169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.47129From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.61089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
54.1886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
13.4124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
13.5413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
14.4541From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.01165From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000634.05359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.39862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.44887From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.62824From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.22706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.01305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.866206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.83457From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.42375From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101111.425From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
39.1886From_analysisRNASeq.briggsae.total_over_all_stages.control_median
114.416From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
38.575From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00142501
OrthologWBGene00019154Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00066046Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00143024Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00149068Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00095962Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00137664Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g11007Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5844Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4765Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12436Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13264Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22954Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13127Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11129Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12503Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g14084Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20371Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00092.g4093Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_15644.g25111Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_22382.g26848Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-glf-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold499.g2251Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02532.g26889Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16259Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013618Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10796Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22050Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40223510Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00224881Brugia malayiFrom_analysisWormBase-Compara
chrIV_pilon.g10521Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00213539Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00073705Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00244227Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267014Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00027980Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029850Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029889Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030975Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039201Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041792Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Is an ortholog of C. elegans glf-1. In C. elegans, glf-1 is involved in polysaccharide biosynthetic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19828
Corresponding_CDS_historyCBG19828:bp194
Corresponding_transcriptCBG19828.1
Other_sequenceMHC01934_1
JI169563.1
EX564350.1
JI471873.1
FC809702.1
MH06075
FC815356.1
Dviv_isotig23158
BXC02045_1
Hbac_isotig02912
MH04489
FC815023.1
RS09910
SR00328
FC809990.1
BUC01849_1
PSC01434_1
SS00414
MH06074
HG01055
FC809445.1
Tcol_isotig19198
CRC08549_1
GO251125.1
MA01137
SRC07420_2
MHC11590_1
SRC07420_1
Dviv_isotig15327
FC815182.1
MHC02588_1
MHC02350_1
JI475373.1
PPC09129_1
MH05403
SSC03048_1
EX910317.1
JI468174.1
ACC20107_1
HBC20315_1
RSC01689_1
MAC00444_1
SRC00186_1
FC809831.1
HGC03542_1
GW408294.1
CJC01775_1
FC814730.1
BXC04346_1
Experimental_infoExpr_patternExpr1068663
Microarray_resultsGPL8303_CB6_WBGene00038984_A
GPL8303_CB6_WBGene00038984_B
GPL14143_CBG19828_807-866_0.918_6_C
GPL14143_CBG19828_1186-1245_0.862_29_A
GPL14143_CBG19828_1319-1378_0.933_1_B
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_downregulated
MethodGene