WormBase Tree Display for Gene: WBGene00039181

WBGene00039181 SMap: S_parent: Sequence: cb25.fpc4152
  Identity: Version: 1
    Name: CGC_name: Cbr-mtrf-1L From_analysis: Inferred_from_orthology
      Sequence_name: CBG20109
      Molecular_name: CBG20109
        CBG20109.1
        CBP24007
      Other_name: CBG_20109 Accession_evidence: NDB HE601481
      Public_name: CBG20109
    DB_info: Database: NDB locus_tag CBG_20109
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:09 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbr-mtrf-1L
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mtrf
    RNASeq_FPKM: WBls:0000002 12.1633 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        17.1631 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        18.3484 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        20.9777 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        18.6731 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        19.663 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        23.203 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 11.0693 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        12.6611 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        14.2529 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        13.1644 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        14.1711 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 10.1417 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        11.5276 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        8.75581 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        10.3705 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        13.9575 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        7.72458 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        9.88699 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 1.03693 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        3.00579 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        4.34719 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        8.99886 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        10.7478 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        5.94734 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        6.00233 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
      WBls:0000035 12.8833 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.6378 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        12.6832 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        12.9095 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        14.1813 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        19.4481 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        5.46545 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 19.7404 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        29.297 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        30.046 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        31.3962 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        32.7464 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        34.6551 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        23.6261 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        24.3114 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        27.1787 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        27.5209 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 13.8158 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        14.4127 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        17.7072 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        18.3244 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        20.6682 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        21.3148 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        18.0749 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        19.1189 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        19.9135 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 13.8158 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        14.8603 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        14.0643 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        15.2234 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00142657
      00142658
    Ortholog (35)
    Structured_description: Automated_description: Predicted to enable translation release factor activity. Predicted to be involved in translational termination. Is an ortholog of C. elegans mtrf-1L. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG20109
    Corresponding_CDS_history: CBG20109:bp194
    Corresponding_transcript: CBG20109.1
    Other_sequence (37)
  Experimental_info: Expr_pattern: Expr1069311
    Microarray_results: GPL8303_CB6_WBGene00039181_A
      GPL14143_CBG20109_406-465_0.909_20_A
      GPL14143_CBG20109_805-864_0.940_2_C
      GPL14143_CBG20109_994-1053_0.934_5_B
  Method: Gene