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WormBase Tree Display for Gene: WBGene00039263

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Name Class

WBGene00039263SMapS_parentSequencecb25.fpc4168
IdentityVersion2
NameCGC_nameCbr-wbp-2From_analysisInferred_from_orthology
Sequence_nameCBG20227
Molecular_nameCBG20227
CBG20227.1
CBP26800
Other_nameCBG_20227Accession_evidenceNDBHE601386
Public_nameCbr-wbp-2
DB_infoDatabaseNDBlocus_tagCBG_20227
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
204 Jun 2020 14:38:21WBPerson1983Name_changeCGC_nameCbr-wbp-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classwbp
AlleleWBVar00028677
WBVar00028682
RNASeq_FPKMWBls:000000214.7758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
16.6594From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
18.4252From_analysisRNASeq.briggsae.WBls:0000002.control_mean
23.8404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.2272From_analysisRNASeq.briggsae.WBls:0000002.control_median
18.7677From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000335.9001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
43.2438From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
50.5875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
43.4458From_analysisRNASeq.briggsae.WBls:0000003.control_mean
43.8497From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000435.0341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
37.0621From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
39.0902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
22.6127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
37.2086From_analysisRNASeq.briggsae.WBls:0000004.control_mean
43.9406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
45.3656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002713.2239From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.799From_analysisRNASeq.briggsae.WBls:0000027.control_mean
22.0853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.08788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.5583From_analysisRNASeq.briggsae.WBls:0000027.control_median
13.5724From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.89264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003514.0095From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.8307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
15.2136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
16.0623From_analysisRNASeq.briggsae.WBls:0000038.control_mean
16.1757From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.1378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
18.067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004122.2004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
23.2194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
23.8358From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.9142From_analysisRNASeq.briggsae.WBls:0000041.control_median
24.6091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
25.3142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
24.9283From_analysisRNASeq.briggsae.WBls:0000041.control_mean
24.9617From_analysisRNASeq.briggsae.WBls:0000041.control_median
25.4082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
28.8184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006317.7266From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
22.2106From_analysisRNASeq.briggsae.WBls:0000063.control_mean
22.4636From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
23.9512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.0395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
12.4494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
20.5837From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.6678From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010120.872From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.2073From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
21.8082From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.8195From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (25)
ParalogWBGene00034806Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: GRAM domain. Is an ortholog of C. elegans wbp-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20227
Corresponding_CDS_historyCBG20227:bp194
Corresponding_transcriptCBG20227.1
Other_sequence (30)
Experimental_infoExpr_patternExpr1061066
Microarray_resultsGPL8303_CB6_WBGene00039263_A
GPL8303_CB6_WBGene00039263_B
GPL14143_CBG20227_298-357_0.632_20_C
GPL14143_CBG20227_339-398_0.549_38_B
GPL14143_CBG20227_672-731_0.681_14_A
MethodGene