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WormBase Tree Display for Gene: WBGene00039544

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Name Class

WBGene00039544SMapS_parentSequencecb25.fpc4202
IdentityVersion2
NameCGC_nameCbr-cyp-32A1From_analysisInferred_from_orthology
Sequence_nameCBG20589
Molecular_nameCBG20589
CBG20589.1
CBP29864
Other_nameCBG_20589Accession_evidenceNDBHE601305
Public_nameCbr-cyp-32A1
DB_infoDatabaseNDBlocus_tagCBG_20589
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-cyp-32A1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcyp
Allele (12)
RNASeq_FPKMWBls:000000212.9719From_analysisRNASeq.briggsae.WBls:0000002.control_mean
24.9887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.27267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.65426From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.6518From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.69149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.96347From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.289652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.315136From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.340621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.318651From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.32568From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.244845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.276553From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.308261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.208852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.278927From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.302665From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.47244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000272.10612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.17099From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.45457From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.08659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
20.6492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.62879From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.50323From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000353.9575From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.7012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
14.4244From_analysisRNASeq.briggsae.WBls:0000038.control_mean
15.7186From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.36803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
23.8924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004113.0037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.37449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.34282From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.83948From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.33614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.51429From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.0123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
15.1836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.67422From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.54218From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.50992From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.10099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.26307From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.4379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.74765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.01378From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.35048From_analysisRNASeq.briggsae.WBls:0000063.control_median
6.53305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001014.4379From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.27661From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.39036From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.06255From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143016
00143017
00143018
00143019
Ortholog (38)
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Is an ortholog of C. elegans cyp-32A1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20589
Corresponding_CDS_historyCBG20589:bp194
Corresponding_transcriptCBG20589.1
Other_sequence (21)
Experimental_infoExpr_patternExpr1065808
Microarray_resultsGPL8303_CB6_WBGene00039544_A
GPL14143_CBG20589_928-987_0.918_10_C
GPL14143_CBG20589_1129-1188_0.922_8_B
GPL14143_CBG20589_1472-1531_0.942_2_A
MethodGene