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WormBase Tree Display for Gene: WBGene00039700

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Name Class

WBGene00039700SMapS_parentSequencecb25.fpc4206c
IdentityVersion2
NameCGC_nameCbr-pqn-27From_analysisInferred_from_orthology
Sequence_nameCBG20778
Molecular_nameCBG20778
CBG20778.1
CBP38940
Other_nameCBG_20778Accession_evidenceNDBHE600928
Public_nameCbr-pqn-27
DB_infoDatabaseNDBlocus_tagCBG_20778
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-pqn-27
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpqn
RNASeq_FPKMWBls:000000247.5706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
51.7501From_analysisRNASeq.briggsae.WBls:0000002.control_mean
51.9898From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
55.6898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
50.8877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
51.4388From_analysisRNASeq.briggsae.WBls:0000002.control_median
51.5345From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000377.3371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
83.8975From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
90.4578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
83.5154From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
83.7701From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000451.8835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
54.1723From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
56.4611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
52.0642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
56.1874From_analysisRNASeq.briggsae.WBls:0000004.control_mean
59.1422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
61.3859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.1777From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
24.1508From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.38681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
58.8878From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
20.3447From_analysisRNASeq.briggsae.WBls:0000027.control_median
25.741From_analysisRNASeq.briggsae.WBls:0000027.control_mean
30.5116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003533.7417From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.8383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
33.5296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
34.8368From_analysisRNASeq.briggsae.WBls:0000038.control_median
34.8601From_analysisRNASeq.briggsae.WBls:0000038.control_mean
36.1441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
56.9285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004162.901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
74.9165From_analysisRNASeq.briggsae.WBls:0000041.control_mean
76.3963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
78.2222From_analysisRNASeq.briggsae.WBls:0000041.control_median
80.0481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
80.3205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
69.3944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
74.6267From_analysisRNASeq.briggsae.WBls:0000041.control_mean
77.548From_analysisRNASeq.briggsae.WBls:0000041.control_median
78.6997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006336.8052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
38.7247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
41.8903From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
41.9833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
48.1822From_analysisRNASeq.briggsae.WBls:0000063.control_mean
81.5074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
41.9368From_analysisRNASeq.briggsae.WBls:0000063.control_median
49.0707From_analysisRNASeq.briggsae.WBls:0000063.control_mean
53.5134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010147.5706From_analysisRNASeq.briggsae.total_over_all_stages.control_median
48.2183From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
50.9854From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
52.027From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (25)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Armadillo-type fold. Is an ortholog of C. elegans pqn-27.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20778
Corresponding_CDS_historyCBG20778:bp194
CBG20778:bp255
Corresponding_transcriptCBG20778.1
Other_sequenceCR02209
CR09699
CBC11258_1
CRC01183_1
Experimental_infoExpr_patternExpr1061708
Microarray_resultsGPL8303_CB6_WBGene00039700_A
GPL8303_CB6_WBGene00039700_B
GPL14143_CBG20778_1120-1179_0.721_95_B
GPL14143_CBG20778_1338-1397_0.763_53_C
GPL14143_CBG20778_1396-1455_0.808_5_A
MethodGene