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WormBase Tree Display for Gene: WBGene00039723

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Name Class

WBGene00039723SMapS_parentSequencecb25.fpc4206c
IdentityVersion3
NameCGC_nameCbr-ctl-1From_analysisInferred_from_orthology
Sequence_nameCBG20805
Molecular_nameCBG20805
CBG20805.1
CBP30421
Other_nameCBG_20805Accession_evidenceNDBHE600928
Cbr-ctl-3From_analysisInferred_from_orthology
Public_nameCbr-ctl-1
DB_infoDatabaseNDBlocus_tagCBG_20805
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:49WBPerson2970Name_changeCGC_nameCbr-ctl-3
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-ctl-1
Other_nameCbr-ctl-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classctl
AlleleWBVar00129019
WBVar00129025
WBVar00129026
WBVar00129020
WBVar00129021
WBVar00129027
WBVar00129022
WBVar00129028
WBVar00129023
WBVar00129024
RNASeq_FPKMWBls:000000232.2686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
36.8567From_analysisRNASeq.briggsae.WBls:0000002.control_mean
37.4815From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
40.8201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
39.1508From_analysisRNASeq.briggsae.WBls:0000002.control_median
40.9726From_analysisRNASeq.briggsae.WBls:0000002.control_mean
53.3204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000345.9133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
57.819From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
69.7246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
58.4948From_analysisRNASeq.briggsae.WBls:0000003.control_mean
59.8466From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.0206From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.46From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
8.58122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.44415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.76618From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.43668From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.93183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.02959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.82987From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.48358From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.59127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
12.5412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.21057From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.49798From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000359.51898From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.2553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
21.8695From_analysisRNASeq.briggsae.WBls:0000038.control_median
22.3543From_analysisRNASeq.briggsae.WBls:0000038.control_mean
28.4837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
37.4872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.19093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004163.3714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
65.6275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
66.2154From_analysisRNASeq.briggsae.WBls:0000041.control_mean
66.6015From_analysisRNASeq.briggsae.WBls:0000041.control_median
67.5756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
68.2872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
122.247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
67.9314From_analysisRNASeq.briggsae.WBls:0000041.control_median
78.4633From_analysisRNASeq.briggsae.WBls:0000041.control_mean
83.6712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006322.1185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
24.3297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
26.8765From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
28.6385From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.6538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
40.214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
28.2652From_analysisRNASeq.briggsae.WBls:0000063.control_median
33.0201From_analysisRNASeq.briggsae.WBls:0000063.control_mean
54.928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010126.8765From_analysisRNASeq.briggsae.total_over_all_stages.control_median
28.6656From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.6801From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.7631From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143193
00143194
00143195
Ortholog (35)
ParalogWBGene00039724Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable catalase activity and heme binding activity. Predicted to be involved in response to oxidative stress. Is an ortholog of C. elegans ctl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20805
Corresponding_CDS_historyCBG20805:bp194
Corresponding_transcriptCBG20805.1
Other_sequence (134)
Experimental_infoExpr_patternExpr1052055
Microarray_resultsGPL8303_CB6_WBGene00039723_A
GPL14143_CBG20805_971-1030_0.590_214_B
GPL14143_CBG20805_996-1055_0.790_16_A
GPL14143_CBG20805_1494-1553_0.820_1_C
MethodGene