Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00040014

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00040014SMapS_parentSequencecb25.fpc4224b
IdentityVersion2
NameCGC_nameCbr-nex-1From_analysisInferred_from_orthology
Sequence_nameCBG21168
Molecular_nameCBG21168
CBG21168.1
CBP05037
Other_nameCBG_21168Accession_evidenceNDBHE600921
Public_nameCbr-nex-1
DB_infoDatabaseNDBlocus_tagCBG_21168
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nex-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnex
AlleleWBVar00129434
RNASeq_FPKMWBls:0000002167.175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
169.538From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
213.482From_analysisRNASeq.briggsae.WBls:0000002.control_mean
303.732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
140.21From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
168.357From_analysisRNASeq.briggsae.WBls:0000002.control_median
195.164From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000315.9018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
16.1747From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
16.4476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
12.3184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
14.8893From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000420.6959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
23.0887From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
25.4815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
21.3588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
24.2742From_analysisRNASeq.briggsae.WBls:0000004.control_mean
25.7039From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
28.1309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002715.1274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
34.0769From_analysisRNASeq.briggsae.WBls:0000027.control_mean
35.4305From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
51.6727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
257.202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
43.5516From_analysisRNASeq.briggsae.WBls:0000027.control_median
89.8581From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035199.523From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038120.469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
154.961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
215.245From_analysisRNASeq.briggsae.WBls:0000038.control_median
215.98From_analysisRNASeq.briggsae.WBls:0000038.control_mean
275.529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
312.961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041143.515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
163.581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
164.168From_analysisRNASeq.briggsae.WBls:0000041.control_median
164.755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
175.896From_analysisRNASeq.briggsae.WBls:0000041.control_mean
231.733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
177.22From_analysisRNASeq.briggsae.WBls:0000041.control_median
185.804From_analysisRNASeq.briggsae.WBls:0000041.control_mean
189.685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
221.556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063178.438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
185.797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
191.431From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
198.106From_analysisRNASeq.briggsae.WBls:0000063.control_mean
208.336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
226.527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
199.883From_analysisRNASeq.briggsae.WBls:0000063.control_median
214.513From_analysisRNASeq.briggsae.WBls:0000063.control_mean
296.547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101144.459From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
163.581From_analysisRNASeq.briggsae.total_over_all_stages.control_median
141.632From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
159.271From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00143497
00143498
Ortholog (29)
ParalogWBGene00030561Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037555Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042679Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity and calcium-dependent phospholipid binding activity. Is an ortholog of C. elegans nex-1. In C. elegans, nex-1 is involved in engulfment of apoptotic cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21168
Corresponding_CDS_historyCBG21168:bp194
Corresponding_transcriptCBG21168.1
Other_sequence (129)
Experimental_infoExpr_patternExpr1062943
Microarray_resultsGPL8303_CB6_WBGene00040014_A
GPL8303_CB6_WBGene00040014_B
GPL8303_CB6_WBGene00040014_C
GPL14143_CBG21168_152-211_0.893_1_B
GPL14143_CBG21168_162-221_0.760_17_C
GPL14143_CBG21168_543-602_0.849_2_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene